Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RNA-directed DNA polymerase activity

Term: GO:0003964  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene195550 SustainPine v3.0 467
• AutoFact: Os07g0434200 protein (Fragment) n=2 Tax=Oryza sativa RepID=Q0D6W3_ORYSJ 9.0e-29
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Putative pol polyprotein 1.977e-09
C-terminus
sp_v3.0_unigene195596 SustainPine v3.0 187
• AutoFact: cytochrome P450 [Pyrus communis] 5.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome P450 3.205e-15
Internal
sp_v3.0_unigene195604 SustainPine v3.0 456
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus elliottii RepID=O65863_PINEL 2.0e-31
• FL-Next: tr=Putative non-LTR retroelement reverse transcriptase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative non-LTR retroelement reverse transcriptase 2.784e-06
Internal
sp_v3.0_unigene195762 SustainPine v3.0 413
• AutoFact: Sterol desaturase [Medicago truncatula] 5.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome undetermined scaffold_268, whole genome shotgun sequence 8.507e-11
N-terminus
sp_v3.0_unigene195794 SustainPine v3.0 210
• AutoFact: putative glycerol 3-phosphate permease [Zea mays] 9.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative glycerol 3-phosphate permease 4.145e-13
Internal
sp_v3.0_unigene196145 SustainPine v3.0 323
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=2 Tax=Oryza sativa RepID=Q10GH3_ORYSJ 1.0e-27
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
Internal
sp_v3.0_unigene196179 SustainPine v3.0 474
• AutoFact: OSJNBa0004L19.22 protein n=1 Tax=Oryza sativa RepID=Q5JPZ2_ORYSA 3.0e-20
• FL-Next: tr=Putative polyprotein; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene196472 SustainPine v3.0 310
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 3.0e-21
• FL-Next: tr=Putative uncharacterized protein; Asparagus officinalis (Garden asparagus). 0.0
Internal
sp_v3.0_unigene196691 SustainPine v3.0 419
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHL9_ARATH 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copia-type polyprotein 9.004e-08
Internal
sp_v3.0_unigene196899 SustainPine v3.0 334
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 3.0e-27
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 1.499e-13
Internal
sp_v3.0_unigene196922 SustainPine v3.0 332
• AutoFact: OSJNBa0091C12.6 protein n=2 Tax=Oryza sativa RepID=Q7XWS6_ORYSJ 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Beta vulgaris (Sugar beet). 0.0
Internal
sp_v3.0_unigene197012 SustainPine v3.0 218
• AutoFact: Putative receptor protein kinase n=1 Tax=Oryza sativa Japonica Group RepID=Q8S3P8_ORYSJ 7.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative Receptor-like serine/threonine kinase(RFK1) 1.084e-12
Internal
sp_v3.0_unigene197125 SustainPine v3.0 282
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQE9_ARATH 4.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene197157 SustainPine v3.0 621
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 4.0e-37
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 5.757e-23
Putative C-terminus
sp_v3.0_unigene197250 SustainPine v3.0 139
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=O82684_GINBI 5.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 7.107e-17
Putative C-terminus
sp_v3.0_unigene197264 SustainPine v3.0 252
• AutoFact: Polyprotein, putative n=1 Tax=Solanum demissum RepID=Q6L3X6_SOLDE 8.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copia-type polyprotein 2.425e-08
Internal
sp_v3.0_unigene197444 SustainPine v3.0 167
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 6.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 9.836e-11
Internal
sp_v3.0_unigene198437 SustainPine v3.0 336
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene198490 SustainPine v3.0 522
• AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 9.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Gag-Pol polyprotein 3.073e-08
Complete
sp_v3.0_unigene198959 SustainPine v3.0 442
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain