Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RNA-directed DNA polymerase activity

Term: GO:0003964  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene15903 SustainPine v3.0 1006
• AutoFact: LYR family of Fe/S cluster biogenesis protein [Arabidopsis thaliana] gb|AAU15177.1| At1g76060 [Arabidopsis thaliana] gb|AEE35791.1| LYR family of Fe/S cluster biogenesis protein [Arabidopsis thaliana] 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene15965 SustainPine v3.0 1028
• AutoFact: Dimer_Tnp_hAT domain containing protein 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene15992 SustainPine v3.0 2325
• AutoFact: Wax2_C multi-domain protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome undetermined scaffold_268, whole genome shotgun sequence 3.048e-20
Complete
sp_v3.0_unigene16314 SustainPine v3.0 532
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene16450 SustainPine v3.0 529
• AutoFact: Sphingoid long-chain bases kinase 1 [Arabidopsis thaliana] ref|NP_851065.1| Sphingoid long-chain bases kinase 1 [Arabidopsis thaliana] sp|Q9LRB0.1|LCBK1_ARATH RecName: Full=Sphingoid long-chain bases kinase 1; Short=AtLCBK1; Short=LCB kinase 1; AltName: F 9.0e-21
• FL-Next: sp=Sphingoid long-chain bases kinase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene16667 SustainPine v3.0 1923
• AutoFact: CTR1-like protein kinase n=1 Tax=Rosa hybrid cultivar RepID=Q93XL9_ROSHC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Map3k delta-1 protein kinase, putative 2.054e-26
Complete
sp_v3.0_unigene16714 SustainPine v3.0 806
• AutoFact: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 [Arabidopsis thaliana] sp|Q67ZE1.2|HSDD2_ARATH RecName: Full=3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2; Short=At3BETAHSD/D2; AltName: Full=4alpha-carboxysterol-C3-dehydrogenase/C4 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 3-beta-hydroxysteroid dehydrogenase 7.95e-12
Internal
sp_v3.0_unigene16798 SustainPine v3.0 413
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 4.0e-26
• FL-Next: tr=Polyprotein; Primula vulgaris. 0.0
Internal
sp_v3.0_unigene17515 SustainPine v3.0 1500
• AutoFact: Cinnamoyl-CoA reductase, putative n=1 Tax=Ricinus communis RepID=B9T062_RICCO 0.0
• FL-Next: sp=Tetraketide alpha-pyrone reductase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Cinnamoyl-CoA reductase 2.382e-23
Complete
sp_v3.0_unigene17614 SustainPine v3.0 1691
• AutoFact: Cinnamoyl-CoA reductase, putative n=1 Tax=Ricinus communis RepID=B9T062_RICCO 0.0
• FL-Next: sp=Tetraketide alpha-pyrone reductase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Cinnamoyl-CoA reductase 2.614e-23
Complete
sp_v3.0_unigene17907 SustainPine v3.0 2345
• AutoFact: Wax2_C multi-domain protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome undetermined scaffold_268, whole genome shotgun sequence 4.331e-20
Complete
sp_v3.0_unigene18162 SustainPine v3.0 1004
• AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] emb|CAA66809.1| hypothetical protein [Arabidopsis thaliana] dbj|BAB01841.1| unnamed protein product [Arabidopsis thaliana] gb|AAL15295.1| AT3g26590/MFE16_11 [Arabidopsis thaliana] gb|AAN73299.1| 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance pump, putative 0.0
Internal
sp_v3.0_unigene18324 SustainPine v3.0 961
• AutoFact: putative zinc finger protein [Hyacinthus orientalis] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA-binding protein HEXBP 1.273e-08
Putative Complete
sp_v3.0_unigene18345 SustainPine v3.0 2215
• AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9SIX2_RICCO 0.0
• FL-Next: sp=Auxin transport protein BIG; Oryza sativa subsp. japonica (Rice). 0.0
Putative C-terminus
sp_v3.0_unigene18815 SustainPine v3.0 2155
• AutoFact: S15/NS1, RNA-binding protein [Arabidopsis thaliana] gb|AAF82151.1|AC034256_15 Contains similarity to an unknown protein T21F11.5 gi|6730725 from Arabidopsis thaliana BAC T21F11 gb|AC018849 and contains a Ribosomal Protein S15 PF|00312 domain gb|AAK32782.1 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Chromosome undetermined scaffold_108, whole genome shotgun sequence 7.92e-09
Complete
sp_v3.0_unigene19296 SustainPine v3.0 247
• AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger, CCHC-type; Peptidase aspartic, active site; Retrotransposon gag protein n=1 Tax=Medicago truncatula RepID=Q2HW87_MEDTR 3.0e-07
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene19453 SustainPine v3.0 651
• AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SDY6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative receptor-type protein kinase LRK1 2.051e-26
Internal
sp_v3.0_unigene19506 SustainPine v3.0 1657
• AutoFact: Vacuolar protein sorting factor 4B-like n=4 Tax=Poaceae RepID=Q5QMP6_ORYSJ 0.0
• FL-Next: tr=Katanin p60 ATPase-containing subunit, putative; Ricinus communis (Castor bean). 0.0
• Sma3: Putative uncharacterized protein At2g45500 3.608e-07
Complete
sp_v3.0_unigene19666 SustainPine v3.0 435
• AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.651e-16
Internal
sp_v3.0_unigene19687 SustainPine v3.0 337
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 7.0e-18
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 1.37e-06
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain