Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ligase activity

Term: GO:0016874  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene31154 SustainPine v3.0 2477
• AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9S209_RICCO 0.0
• FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
• Sma3: 4-coumarate:CoA ligase 0.0
Complete
sp_v3.0_unigene31876 SustainPine v3.0 1998
• AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 0.0
• FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
• Sma3: 4-coumarate:CoA ligase 0.0
Putative Complete
sp_v3.0_unigene31880 SustainPine v3.0 601
• AutoFact: putative E3 ubiquitin-protein ligase ARI8 [Arabidopsis thaliana] sp|Q8W468.1|ARI8_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI8; AltName: Full=ARIADNE-like protein ARI8; AltName: Full=Protein ariadne homolog 8 gb|AAL32886.1| Unknown protei 8.0e-13
• FL-Next: sp=Probable E3 ubiquitin-protein ligase ARI8; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Protein ariadne-1, putative 1.284e-07
Putative C-terminus
sp_v3.0_unigene32874 SustainPine v3.0 633
• AutoFact: Cytosolic glycoprotein FP21 n=2 Tax=Dictyosteliida RepID=D3B7B4_POLPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fimbriata-associated protein 6.917e-23
Complete
sp_v3.0_unigene33343 SustainPine v3.0 549
• AutoFact: Cysteine proteinases-like protein [Arabidopsis thaliana] ref|NP_001078307.1| Cysteine proteinases-like protein [Arabidopsis thaliana] sp|Q8LBZ4.1|OTU_ARATH RecName: Full=OTU domain-containing protein At3g57810 gb|AAM63953.1| unknown [Arabidopsis thaliana] 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein At3g57810 2.694e-09
Internal
sp_v3.0_unigene34070 SustainPine v3.0 3270
• AutoFact: long chain acyl-CoA synthetase 9 [Arabidopsis thaliana] sp|Q9CAP8.1|LACS9_ARATH RecName: Full=Long chain acyl-CoA synthetase 9, chloroplastic gb|AAG51668.1|AC010704_12 putative acyl-CoA synthetase; 62297-59022 [Arabidopsis thaliana] gb|AAM28876.1|AF503759 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative acyl-CoA synthetase 1.539e-10
Complete
sp_v3.0_unigene34128 SustainPine v3.0 2424
• AutoFact: Long-chain acyl-CoA synthetase 4 n=2 Tax=Ricinus communis RepID=B3TZ27_RICCO 0.0
• FL-Next: sp=Long chain acyl-CoA synthetase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative acyl-CoA synthetase 5.455e-23
Complete
sp_v3.0_unigene34428 SustainPine v3.0 501
• AutoFact: RING/U-box domain-containing protein n=4 Tax=Arabidopsis RepID=F4JWA1_ARATH 3.0e-10
• FL-Next: tr=cDNA clone:J023011H14, full insert sequence; Oryza sativa subsp. japonica (Rice). 0.0
C-terminus
sp_v3.0_unigene34729 SustainPine v3.0 661
• AutoFact: ubiquitin ligase protein cop1, putative (EC:1.3.1.74); K10143 E3 ubiquitin-protein ligase RFWD2 [EC:6.3.2.19] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin ligase protein cop1, putative 9.041e-14
C-terminus
sp_v3.0_unigene35323 SustainPine v3.0 468
• AutoFact: Acetyl-CoA carboxylase n=7 Tax=rosids RepID=D2CFN2_9ROSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acetyl-CoA carboxylase 6.515e-18
Putative N-terminus
sp_v3.0_unigene36080 SustainPine v3.0 484
• AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9R8J7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl:coa ligase 3.86e-38
C-terminus
sp_v3.0_unigene36734 SustainPine v3.0 2544
• AutoFact: chloroplast biotin carboxylase [Gossypium hirsutum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Predicted protein 0.0
Complete
sp_v3.0_unigene36768 SustainPine v3.0 455
• AutoFact: AMP dependent ligase, putative n=1 Tax=Ricinus communis RepID=B9S6X4_RICCO 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AMP dependent ligase, putative 7.488e-31
C-terminus
sp_v3.0_unigene36823 SustainPine v3.0 474
• AutoFact: ACS2 n=1 Tax=Ricinus communis RepID=A1X860_RICCO 4.0e-19
• FL-Next: sp=Long chain acyl-CoA synthetase 6, peroxisomal; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: AMP-binding protein 6.448e-11
N-terminus
sp_v3.0_unigene37556 SustainPine v3.0 2187
• AutoFact: Cleavage and polyadenylation specificity factor, putative n=1 Tax=Ricinus communis RepID=B9RC56_RICCO 3.9937e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cleavage and polyadenylation specificity factor, putative 6.45e-11
Complete
sp_v3.0_unigene37687 SustainPine v3.0 1844
• AutoFact: AMP dependent ligase, putative n=1 Tax=Ricinus communis RepID=B9S6X4_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AMP dependent ligase, putative 1.015e-33
Putative Complete
sp_v3.0_unigene38730 SustainPine v3.0 1382
• AutoFact: 4-coumarate-CoA ligase-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl:coa ligase 4.447e-38
C-terminus
sp_v3.0_unigene38874 SustainPine v3.0 558
• AutoFact: RNA ligase n=3 Tax=Arabidopsis RepID=Q0WL81_ARATH 0.0
• FL-Next: tr=RNA ligase isoform; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
• Sma3: RNA ligase isoform 3 5.586e-10
Internal
sp_v3.0_unigene39999 SustainPine v3.0 231
• AutoFact: Unassigned protein
• FL-Next: tr=Uncharacterized protein; Oryza glaberrima (African rice). 0.0
Internal
sp_v3.0_unigene41396 SustainPine v3.0 680
• AutoFact: 4-coumarate--CoA ligase-like 5 n=3 Tax=Arabidopsis RepID=4CLL5_ARATH 5.99994e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain