Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ligase activity

Term: GO:0016874  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene127292 SustainPine v3.0 1472
• AutoFact: Acyl:coa ligase n=1 Tax=Populus trichocarpa RepID=B9GMK1_POPTR 0.0
• FL-Next: sp=4-coumarate--CoA ligase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Acyl:coa ligase 1.707e-34
C-terminus
sp_v3.0_unigene127435 SustainPine v3.0 510
• AutoFact: AMP-dependent synthetase and ligase-like protein [Arabidopsis thaliana] gb|AAM28620.1|AF503762_1 adenosine monophosphate binding protein 3 AMPBP3 [Arabidopsis thaliana] emb|CAB62011.1| 4-coumarate-CoA ligase-like protein [Arabidopsis thaliana] gb|AAK92759 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 4-coumarate-CoA ligase-like protein 8.339e-09
Internal
sp_v3.0_unigene127584 SustainPine v3.0 942
• AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 0.0
• FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
• Sma3: 4-coumarate:CoA ligase 3.697e-38
Misassembled
sp_v3.0_unigene127950 SustainPine v3.0 815
• AutoFact: Cullin-4 n=2 Tax=Arabidopsis RepID=CUL4_ARATH 8.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cullin 8.434e-18
Misassembled
sp_v3.0_unigene127964 SustainPine v3.0 882
• AutoFact: Copine I-like protein n=4 Tax=Oryza RepID=Q6YYC5_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copine, putative 9.041e-21
N-terminus
sp_v3.0_unigene128220 SustainPine v3.0 418
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9S0D8_RICCO 6.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CHY zinc finger family protein, expressed 1.397e-13
Internal
sp_v3.0_unigene128709 SustainPine v3.0 503
• AutoFact: zinc finger protein [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CHY zinc finger family protein, expressed 2.383e-24
Putative N-terminus
sp_v3.0_unigene129080 SustainPine v3.0 330
• AutoFact: Putative AMP-binding protein [Oryza sativa Japonica Group] 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AMP dependent ligase, putative 3.967e-11
C-terminus
sp_v3.0_unigene129155 SustainPine v3.0 567
• AutoFact: ring finger and CHY zinc finger domain-containing protein 1 [Arabidopsis thaliana] dbj|BAB10613.1| PGPD14 protein [Arabidopsis thaliana] gb|AAK96553.1| AT5g22920/MRN17_15 [Arabidopsis thaliana] gb|AAO11551.1| At5g22920/MRN17_15 [Arabidopsis thaliana] gb|A 5.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RING finger and CHY zinc finger domain-containing protein 1 5.047e-11
Complete
sp_v3.0_unigene129486 SustainPine v3.0 348
• AutoFact: CHY-type zinc finger protein n=2 Tax=Triticeae RepID=D2XP11_WHEAT 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CHY zinc finger family protein, expressed 2.227e-24
Internal
sp_v3.0_unigene129734 SustainPine v3.0 521
• AutoFact: Zinc finger, RING-type n=1 Tax=Medicago truncatula RepID=A2Q4Q8_MEDTR 5.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNA-binding protein 3.568e-08
C-terminus
sp_v3.0_unigene130209 SustainPine v3.0 668
• AutoFact: Ubiquitin-activating enzyme E1 n=2 Tax=Selaginella moellendorffii RepID=D8T5S9_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin-activating enzyme E1 0.0
N-terminus
sp_v3.0_unigene130457 SustainPine v3.0 607
• AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9SCH9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl:coa ligase 4.164e-38
C-terminus
sp_v3.0_unigene130702 SustainPine v3.0 428
• AutoFact: Long-chain-fatty-acid-CoA ligase-like protein n=4 Tax=Arabidopsis RepID=Q9LW70_ARATH 4.99983e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Long-chain-fatty-acid-CoA ligase-like protein 1.736e-09
Internal
sp_v3.0_unigene130752 SustainPine v3.0 249
• AutoFact: E3 ubiquitin-protein ligase BRE1-like 2 [Arabidopsis thaliana] gb|ABJ17142.1| At1g55255 [Arabidopsis thaliana] gb|AEE33211.1| E3 ubiquitin-protein ligase BRE1-like 2 [Arabidopsis thaliana] 3.0e-19
• FL-Next: sp=E3 ubiquitin-protein ligase BRE1-like 2; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: E3 ubiquitin-protein ligase BRE1-like 2 2.613e-08
C-terminus
sp_v3.0_unigene131334 SustainPine v3.0 375
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RT88_RICCO 3.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene131834 SustainPine v3.0 319
• AutoFact: Indole-3-acetic acid-amido synthetase GH3.5 n=6 Tax=Brassicaceae RepID=GH35_ARATH 3.0e-16
• FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
• Sma3: GH3 family protein 3.522e-10
Internal
sp_v3.0_unigene132455 SustainPine v3.0 507
• AutoFact: Plastidial lipoyltransferase 2 n=2 Tax=Arabidopsis RepID=LIP2P_ARATH 0.0
• FL-Next: sp=Plastidial lipoyltransferase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Lipoate protein ligase 1.062e-08
Internal
sp_v3.0_unigene132918 SustainPine v3.0 518
• AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 3.0e-23
• FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
• Sma3: 4-coumarate:CoA ligase 1.007e-34
Internal
sp_v3.0_unigene134310 SustainPine v3.0 328
• AutoFact: RING finger and CHY zinc finger domain-containing protein 1 n=2 Tax=Zea mays RepID=B6T4N6_MAIZE 4.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CHY zinc finger family protein, expressed 6.106e-14
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain