Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ligase activity

Term: GO:0016874  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene106556 SustainPine v3.0 427
• AutoFact: SPA1-related 4 protein [Arabidopsis thaliana] ref|NP_849802.1| SPA1-related 4 protein [Arabidopsis thaliana] sp|Q94BM7.1|SPA4_ARATH RecName: Full=Protein SPA1-RELATED 4 gb|AAK64180.1| putative phytochrome A supressor spa1 protein [Arabidopsis thaliana] gb 4.2039e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin ligase protein cop1, putative 7.641e-14
Putative N-terminus
sp_v3.0_unigene107079 SustainPine v3.0 285
• AutoFact: indole-3-acetic acid-amido synthetase GH3.6 [Arabidopsis thaliana] sp|Q9LSQ4.1|GH36_ARATH RecName: Full=Indole-3-acetic acid-amido synthetase GH3.6; AltName: Full=Auxin-responsive GH3-like protein 6; Short=AtGH3-6; AltName: Full=Protein DWARF IN LIGHT 1; 7.0e-26
• FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
• Sma3: GH3 family protein 1.754e-23
Internal
sp_v3.0_unigene108095 SustainPine v3.0 300
• AutoFact: indole-3-acetic acid-amido synthetase GH3.5 [Arabidopsis thaliana] sp|O81829.1|GH35_ARATH RecName: Full=Indole-3-acetic acid-amido synthetase GH3.5; AltName: Full=Auxin-responsive GH3-like protein 5; Short=AtGH3-5 emb|CAA19720.1| GH3 like protein [Arabido 3.0e-38
• FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
• Sma3: GH3 family protein 5.513e-23
Internal
sp_v3.0_unigene108828 SustainPine v3.0 464
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene109146 SustainPine v3.0 416
• AutoFact: Unassigned protein
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene110928 SustainPine v3.0 225
• AutoFact: Ubiquitin-activating enzyme E1 n=2 Tax=Physcomitrella patens subsp. patens RepID=A9REZ6_PHYPA 2.0e-22
• FL-Next: sp=Ubiquitin-activating enzyme E1 3; Triticum aestivum (Wheat). 0.0
• Sma3: Ubiquitin-activating enzyme E1 0.0
Internal
sp_v3.0_unigene112824 SustainPine v3.0 784
• AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9SCH9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl:coa ligase 3.811e-25
Internal
sp_v3.0_unigene113525 SustainPine v3.0 313
• AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9SCH9_RICCO 4.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl:coa ligase 7.425e-15
Internal
sp_v3.0_unigene114269 SustainPine v3.0 405
• AutoFact: long-chain-fatty-acid-CoA ligase-like protein [Arabidopsis thaliana] 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Long-chain-fatty-acid-CoA ligase-like protein 8.693e-10
Internal
sp_v3.0_unigene115818 SustainPine v3.0 376
• AutoFact: Ubiquitin-activating enzyme E1 n=2 Tax=Populus trichocarpa RepID=B9GGR5_POPTR 3.00018e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin-activating enzyme E1 0.0
Internal
sp_v3.0_unigene116413 SustainPine v3.0 351
• AutoFact: zinc finger protein-like [Oryza sativa Japonica Group] 2.0e-32
• FL-Next: tr=Putative uncharacterized protein Sb03g031610; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
• Sma3: Putative zinc finger protein 1.515e-10
Putative N-terminus
sp_v3.0_unigene117075 SustainPine v3.0 356
• AutoFact: Ubiquitin-activating enzyme E1 n=2 Tax=Selaginella moellendorffii RepID=D8T5S9_SELML 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin-activating enzyme E1 0.0
N-terminus
sp_v3.0_unigene117863 SustainPine v3.0 278
• AutoFact: 4-coumarate-coa ligase n=2 Tax=Populus trichocarpa RepID=B9H3P7_POPTR 4.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 4-coumarate-coa ligase 1.84e-08
N-terminus
sp_v3.0_unigene118156 SustainPine v3.0 514
• AutoFact: 3-methylcrotonyl CoA carboxylase, beta subunit [Oceanospirillum sp. MED92] gb|EAR62661.1| 3-methylcrotonyl CoA carboxylase, beta subunit [Oceanospirillum sp. MED92] 0.0
• FL-Next: sp=Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene119903 SustainPine v3.0 368
• AutoFact: Zinc finger protein-like n=1 Tax=Oryza sativa Japonica Group RepID=Q5N7K2_ORYSJ 3.0e-35
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene120012 SustainPine v3.0 225
• AutoFact: ankyrin-repeat containing protein [Arabidopsis thaliana] 9.0e-19
• FL-Next: sp=E3 ubiquitin-protein ligase KEG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene121628 SustainPine v3.0 168
• AutoFact: zinc finger protein-like protein [Arabidopsis thaliana] gb|AAM19839.1| AT3g18290/MIE15_8 [Arabidopsis thaliana] gb|AAO64754.1| At3g18290/MIE15_8 [Arabidopsis thaliana] gb|AEE76077.1| zinc finger protein-like protein [Arabidopsis thaliana] 6.0e-12
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene124969 SustainPine v3.0 560
• AutoFact: RNA ligase isoform 1 [Triticum aestivum] 0.0
• FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Internal
sp_v3.0_unigene125434 SustainPine v3.0 231
• AutoFact: acetyl-CoA carboxylase [Medicago sativa] 4.0e-28
• FL-Next: sp=Acetyl-CoA carboxylase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Acetyl-CoA carboxylase 4.218e-15
Internal
sp_v3.0_unigene125801 SustainPine v3.0 229
• AutoFact: Acetyl-CoA carboxylase n=7 Tax=rosids RepID=D2CFN2_9ROSI 9.0e-18
• FL-Next: sp=Acetyl-CoA carboxylase 1; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Acetyl-CoA carboxylase 9.203e-12
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain