Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ligase activity

Term: GO:0016874  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene71703 SustainPine v3.0 240
AutoFact: indole-3-acetic acid-amido synthetase GH3.6 [Arabidopsis thaliana] sp|Q9LSQ4.1|GH36_ARATH RecName: Full=Indole-3-acetic acid-amido synthetase GH3.6; AltName: Full=Auxin-responsive GH3-like protein 6; Short=AtGH3-6; AltName: Full=Protein DWARF IN LIGHT 1; 5.0e-24
FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
Sma3: GH3 family protein 1.176e-23
Internal
sp_v3.0_unigene72076 SustainPine v3.0 186
AutoFact: Similar to gb|AF049930 PGP237-11 from Petunia x hybrida and contains a PF|00097 Zinc (RING) finger domain [Arabidopsis thaliana] gb|AAS47676.1| At1g74760 [Arabidopsis thaliana] gb|AAZ14062.1| At1g74760 [Arabidopsis thaliana] 9.0e-11
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene72093 SustainPine v3.0 413
AutoFact: indole-3-acetic acid-amido synthetase GH3.5 [Arabidopsis thaliana] sp|O81829.1|GH35_ARATH RecName: Full=Indole-3-acetic acid-amido synthetase GH3.5; AltName: Full=Auxin-responsive GH3-like protein 5; Short=AtGH3-5 emb|CAA19720.1| GH3 like protein [Arabido 0.0
FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
Sma3: GH3 family protein 4.586e-23
Internal
sp_v3.0_unigene72145 SustainPine v3.0 291
AutoFact: PREDICTED: similar to adenosine monophosphate binding protein 1 AMPBP1 n=1 Tax=Vitis vinifera RepID=UPI0001985120 9.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AMP dependent ligase, putative 6.269e-11
C-terminus
sp_v3.0_unigene72279 SustainPine v3.0 221
AutoFact: Acetyl-CoA carboxylase, putative n=1 Tax=Ricinus communis RepID=B9SFG9_RICCO 4.0e-15
FL-Next: sp=Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 7.328e-13
C-terminus
sp_v3.0_unigene72391 SustainPine v3.0 246
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9S0D8_RICCO 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CHY zinc finger family protein, expressed 8.474e-14
Internal
sp_v3.0_unigene72414 SustainPine v3.0 278
AutoFact: Ankyrin-repeat containing protein, putative n=1 Tax=Ricinus communis RepID=B9RG78_RICCO 3.0e-31
FL-Next: sp=E3 ubiquitin-protein ligase KEG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene72478 SustainPine v3.0 119
AutoFact: Propionyl-CoA carboxylase beta chain n=6 Tax=Poaceae RepID=B6SWZ4_MAIZE 2.0e-10
FL-Next: sp=Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene73133 SustainPine v3.0 267
AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9R9A8_RICCO 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AMP dependent CoA ligase, putative 3.466e-07
Internal
sp_v3.0_unigene73162 SustainPine v3.0 161
AutoFact: Putative AMP-binding protein [Oryza sativa Japonica Group] 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene73550 SustainPine v3.0 403
AutoFact: Glutamine synthetase nodule isozyme n=2 Tax=Pisum sativum RepID=GLNA1_PEA 1.0e-24
FL-Next: sp=Glutamine synthetase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene73977 SustainPine v3.0 432
AutoFact: Adenosine monophosphate binding protein 2 AMPBP2 n=2 Tax=Arabidopsis RepID=Q9SEY5_ARATH 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AMP dependent ligase, putative 1.327e-26
Internal
sp_v3.0_unigene74368 SustainPine v3.0 446
AutoFact: Biotin/lipoyl attachment:Carbamoyl-phosphate synthase subunit L n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=D6RJR4_COPC7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Acetyl-CoA carboxylase 2.793e-11
Internal
sp_v3.0_unigene74525 SustainPine v3.0 361
AutoFact: RecName: Full=Octanoyltransferase; AltName: Full=Lipoate-protein ligase B; AltName: Full=Lipoyl/octanoyl transferase; AltName: Full=Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase 1.0e-26
FL-Next: sp=Putative lipoyltransferase-like protein, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene74531 SustainPine v3.0 234
AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 3.0e-13
FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
Internal
sp_v3.0_unigene74771 SustainPine v3.0 291
AutoFact: Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial n=2 Tax=Solanum RepID=SUCB_SOLLC 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Succinyl-CoA synthetase beta chain 4.688e-09
Internal
sp_v3.0_unigene74886 SustainPine v3.0 342
AutoFact: embryo sac development arrest 18 protein [Arabidopsis thaliana] gb|AEC09039.1| embryo sac development arrest 18 protein [Arabidopsis thaliana] 1.0e-07
FL-Next: tr=Putative uncharacterized protein; subsp. trichocarpa). 0.0
Misassembled
sp_v3.0_unigene75418 SustainPine v3.0 337
AutoFact: SCF ubiquitin ligase n=4 Tax=Picea RepID=Q3ZDI8_PICAB 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fimbriata-associated protein 2.74e-23
N-terminus
sp_v3.0_unigene75471 SustainPine v3.0 193
AutoFact: 4-coumarate-CoA ligase-like protein [Arabidopsis thaliana] 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene75687 SustainPine v3.0 340
AutoFact: Acyl:coa ligase acetate-coa synthetase-like protein n=4 Tax=Populus trichocarpa RepID=B9GUB7_POPTR 3.00004e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AMP dependent ligase, putative 8.34e-34
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain