Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ligase activity

Term: GO:0016874  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene65030 SustainPine v3.0 130
AutoFact: Ubiquitin-activating enzyme E1 n=1 Tax=Sorghum bicolor RepID=C5WNH5_SORBI 2.0e-10
FL-Next: sp=Ubiquitin-activating enzyme E1 2; Triticum aestivum (Wheat). 0.0
Sma3: Ubiquitin-activating enzyme E1 1.091e-25
Internal
sp_v3.0_unigene65480 SustainPine v3.0 364
AutoFact: E3 ubiquitin-protein ligase KEG [Arabidopsis thaliana] sp|Q9FY48.2|KEG_ARATH RecName: Full=E3 ubiquitin-protein ligase KEG; AltName: Full=Protein KEEP ON GOING; AltName: Full=RING finger protein KEG gb|ABC46683.1| RING E3 ligase protein [Arabidopsis thali 3.0e-10
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: 26S proteasome non-ATPase regulatory subunit 14 9.67e-09
Complete
sp_v3.0_unigene65538 SustainPine v3.0 163
AutoFact: putative acyl-CoA synthetase [Oryza sativa Japonica Group] 2.0e-13
FL-Next: sp=Long chain acyl-CoA synthetase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative acyl-CoA synthetase 1.559e-17
Internal
sp_v3.0_unigene65769 SustainPine v3.0 152
AutoFact: Unassigned protein
FL-Next: sp=Probable E3 ubiquitin-protein ligase ARI8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene65834 SustainPine v3.0 131
AutoFact: SCF ubiquitin ligase n=4 Tax=Picea RepID=Q3ZDI8_PICAB 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fimbriata-associated protein 1.379e-24
Internal
sp_v3.0_unigene66831 SustainPine v3.0 461
AutoFact: Auxin responsive GH3-like protein (Fragment) n=3 Tax=Picea sitchensis RepID=E0ZF61_PICSI 0.0
FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
Sma3: GH3 family protein 8.21e-24
C-terminus
sp_v3.0_unigene67132 SustainPine v3.0 352
AutoFact: 3-methylcrotonyl-CoA carboxylase, biotin-carrier domain [Glycine max] 1.0e-20
FL-Next: sp=Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 7.093e-13
Internal
sp_v3.0_unigene67255 SustainPine v3.0 181
AutoFact: Ubiquitin-activating enzyme E1 n=2 Tax=Physcomitrella patens subsp. patens RepID=A9REZ6_PHYPA 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin-activating enzyme E1 7.28675e-44
Internal
sp_v3.0_unigene67268 SustainPine v3.0 232
AutoFact: E3 SUMO-protein ligase SIZ1 [Arabidopsis thaliana] ref|NP_001119465.1| E3 SUMO-protein ligase SIZ1 [Arabidopsis thaliana] gb|AED97324.1| E3 SUMO-protein ligase SIZ1 [Arabidopsis thaliana] gb|AED97328.1| E3 SUMO-protein ligase SIZ1 [Arabidopsis thaliana] 3.0e-09
FL-Next: Isoform 2 of E3 SUMO-protein ligase SIZ1 OS=Arabidopsis thaliana GN=SIZ1 0.0
Internal
sp_v3.0_unigene67352 SustainPine v3.0 219
AutoFact: Fimbriata-associated protein (Fragment) n=1 Tax=Plantago major RepID=Q1EMN7_PLAMJ 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fimbriata-associated protein 6.051e-24
C-terminus
sp_v3.0_unigene67371 SustainPine v3.0 377
AutoFact: Ubiquitin-activating enzyme E1 n=2 Tax=Populus trichocarpa RepID=B9GGR5_POPTR 3.0e-32
FL-Next: sp=Ubiquitin-activating enzyme E1 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ubiquitin-activating enzyme E1 0.0
Internal
sp_v3.0_unigene67549 SustainPine v3.0 304
AutoFact: Ubiquitin-activating enzyme E1 n=2 Tax=Selaginella moellendorffii RepID=D8T5S9_SELML 8.0e-32
FL-Next: sp=Ubiquitin-activating enzyme E1 2; Triticum aestivum (Wheat). 0.0
Sma3: Ubiquitin-activating enzyme E1 4.227e-36
Internal
sp_v3.0_unigene67959 SustainPine v3.0 217
AutoFact: zinc finger protein-like [Oryza sativa Japonica Group] 8.0e-17
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene68186 SustainPine v3.0 128
AutoFact: Ubiquitin-activating enzyme E1 n=1 Tax=Volvox carteri f. nagariensis RepID=D8TL95_VOLCA 5.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin-activating enzyme E1 1.802e-26
Internal
sp_v3.0_unigene68541 SustainPine v3.0 198
AutoFact: Auxin responsive GH3-like protein (Fragment) n=3 Tax=Picea sitchensis RepID=E0ZF61_PICSI 8.0e-22
FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
Sma3: GH3 family protein 9.867e-14
Putative C-terminus
sp_v3.0_unigene69142 SustainPine v3.0 247
AutoFact: Ubiquitin-activating enzyme E1 n=1 Tax=Ricinus communis RepID=B9SKZ1_RICCO 1.0e-20
FL-Next: sp=Ubiquitin-activating enzyme E1 2; Triticum aestivum (Wheat). 0.0
Sma3: Ubiquitin-activating enzyme E1 3.72e-36
Internal
sp_v3.0_unigene69330 SustainPine v3.0 209
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAK82555.1| AT5g41350/MYC6_6 [Arabidopsis thaliana] gb|AAN28767.1| At5g41350/MYC6_6 [Arabidopsis thaliana] gb|AED94668.1| RING/U-box domain-containing protein [Arabidopsis thaliana] 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene69360 SustainPine v3.0 210
AutoFact: Lipoate-protein ligase B, putative n=1 Tax=Ricinus communis RepID=B9SJ07_RICCO 2.0e-15
FL-Next: sp=Octanoyltransferase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene69791 SustainPine v3.0 209
AutoFact: Skp1 domain containing protein 3.0e-20
Sma3: Fimbriata-associated protein 1.585e-24
unknown
sp_v3.0_unigene71190 SustainPine v3.0 271
AutoFact: Acetyl-CoA carboxylase, putative n=1 Tax=Ricinus communis RepID=B9SFG9_RICCO 3.0e-14
FL-Next: sp=Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 7.328e-13
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain