Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: ligase activity

Term: GO:0016874  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene57566 SustainPine v3.0 260
• AutoFact: photoregulatory zinc-finger protein COP1 [Rosa hybrid cultivar] 9.0e-24
• FL-Next: sp=E3 ubiquitin-protein ligase COP1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: COP1 6.811e-11
Internal
sp_v3.0_unigene57738 SustainPine v3.0 508
• AutoFact: Indole-3-acetic acid-amido synthetase GH3.5 n=6 Tax=Brassicaceae RepID=GH35_ARATH 0.0
• FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
• Sma3: GH3 family protein 3.54e-23
Internal
sp_v3.0_unigene58436 SustainPine v3.0 456
• AutoFact: RNA ligase [Arabidopsis thaliana] ref|NP_001154320.1| RNA ligase [Arabidopsis thaliana] dbj|BAF02126.1| translation elongation factor EF-1 alpha [Arabidopsis thaliana] gb|AEE28210.1| RNA ligase [Arabidopsis thaliana] gb|AEE28211.1| RNA ligase [Arabidopsis 1.0e-09
• FL-Next: tr=RNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v3.0_unigene58440 SustainPine v3.0 468
• AutoFact: RNA ligase [Arabidopsis thaliana] ref|NP_001154320.1| RNA ligase [Arabidopsis thaliana] dbj|BAF02126.1| translation elongation factor EF-1 alpha [Arabidopsis thaliana] gb|AEE28210.1| RNA ligase [Arabidopsis thaliana] gb|AEE28211.1| RNA ligase [Arabidopsis 3.0e-38
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene58627 SustainPine v3.0 463
• AutoFact: SCF ubiquitin ligase n=4 Tax=Picea RepID=Q3ZDI8_PICAB 4.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Kinetochore protein 1.071e-14
Putative Complete
sp_v3.0_unigene58918 SustainPine v3.0 274
• AutoFact: Acetyl-CoA carboxylase, putative n=1 Tax=Ricinus communis RepID=B9SFG9_RICCO 5.0e-15
• FL-Next: sp=Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 7.328e-13
C-terminus
sp_v3.0_unigene59189 SustainPine v3.0 392
• AutoFact: Acyl:coa ligase acetate-coa synthetase-like protein n=4 Tax=Populus trichocarpa RepID=B9GUB7_POPTR 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AMP dependent ligase, putative 3.736e-34
Internal
sp_v3.0_unigene59715 SustainPine v3.0 210
• AutoFact: KEG; KEG (KEEP ON GOING); protein binding / protein kinase/ ubiquitin-protein ligase 4.0e-09
• FL-Next: sp=E3 ubiquitin-protein ligase KEG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene60119 SustainPine v3.0 306
• AutoFact: Nt-gh3 deduced protein n=2 Tax=Solanaceae RepID=Q9XEY0_TOBAC 9.99995e-41
• FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
• Sma3: GH3 family protein 1.038e-23
Internal
sp_v3.0_unigene60497 SustainPine v3.0 330
• AutoFact: Unassigned protein
• FL-Next: sp=E3 ubiquitin-protein ligase XB3; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Putative RING zinc finger ankyrin protein 2.95e-08
Internal
sp_v3.0_unigene60557 SustainPine v3.0 179
• AutoFact: Ubiquitin-activating enzyme E1, putative n=1 Tax=Ricinus communis RepID=B9STZ8_RICCO 2.0e-10
• FL-Next: sp=Adenylyltransferase and sulfurtransferase MOCS3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Sulfurtransferase MOCS3 2.103e-08
Internal
sp_v3.0_unigene60805 SustainPine v3.0 165
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Tumor-related protein 1.083e-08
Internal
sp_v3.0_unigene61340 SustainPine v3.0 236
• AutoFact: zinc ion binding protein [Arabidopsis thaliana] ref|NP_001032153.1| zinc ion binding protein [Arabidopsis thaliana] gb|ABF74707.1| At5g65740 [Arabidopsis thaliana] dbj|BAH20140.1| AT5G65740 [Arabidopsis thaliana] gb|AED98097.1| zinc ion binding protein [A 1.0e-08
• FL-Next: tr=Putative uncharacterized protein At5g65740/MPA24_9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene62226 SustainPine v3.0 98
• AutoFact: zinc finger protein-like protein [Arabidopsis thaliana] gb|AAM19839.1| AT3g18290/MIE15_8 [Arabidopsis thaliana] gb|AAO64754.1| At3g18290/MIE15_8 [Arabidopsis thaliana] gb|AEE76077.1| zinc finger protein-like protein [Arabidopsis thaliana] 4.0e-08
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene62321 SustainPine v3.0 120
• AutoFact: PREDICTED: similar to adenosine monophosphate binding protein 1 AMPBP1 n=1 Tax=Vitis vinifera RepID=UPI0001985120 6.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AMP dependent ligase, putative 4.937e-15
Internal
sp_v3.0_unigene63291 SustainPine v3.0 162
• AutoFact: putative zinc finger protein [Oryza sativa Japonica Group] 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene63432 SustainPine v3.0 236
• AutoFact: E3 ubiquitin ligase apc2, putative n=1 Tax=Ricinus communis RepID=B9S900_RICCO 3.0e-17
• FL-Next: sp=Anaphase-promoting complex subunit 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene63722 SustainPine v3.0 186
• AutoFact: RNA ligase n=3 Tax=Arabidopsis RepID=Q0WL81_ARATH 2.0e-23
• FL-Next: tr=RNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene63938 SustainPine v3.0 164
• AutoFact: PREDICTED: similar to adenosine monophosphate binding protein 1 AMPBP1 n=1 Tax=Vitis vinifera RepID=UPI0001985120 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AMP dependent ligase, putative 2.115e-10
Internal
sp_v3.0_unigene64393 SustainPine v3.0 152
• AutoFact: 4-coumarate:coenzyme A ligase 3 n=4 Tax=Funariaceae RepID=B7SBA1_PHYPA 3.0e-12
• FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
• Sma3: 4-coumarate:CoA ligase 7.28675e-44
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain