Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleobase-containing compound metabolic process

Term: GO:0006139  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene160 SustainPine v3.0 1573
• AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 8.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene657 SustainPine v3.0 3163
• AutoFact: probable ATP-dependent RNA helicase DDX11 [Danio rerio] gb|AAH85645.1| Zgc:92172 [Danio rerio] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene1510 SustainPine v3.0 1089
• AutoFact: Werner Syndrome-like exonuclease [Arabidopsis thaliana] sp|Q84LH3.1|WEX_ARATH RecName: Full=Werner Syndrome-like exonuclease gb|AAO33765.1| Werner Syndrome-like exonuclease [Arabidopsis thaliana] gb|AAR24686.1| At4g13870 [Arabidopsis thaliana] gb|AEE83339 5.60519e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene1809 SustainPine v3.0 1238
• AutoFact: pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative N6-adenosine-methyltransferase MT-A70-like 7.31e-06
N-terminus
sp_v3.0_unigene3324 SustainPine v3.0 1120
• AutoFact: 3'-5' exonuclease, putative [Arabidopsis thaliana] 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene3439 SustainPine v3.0 1860
• AutoFact: Aprataxin, putative n=1 Tax=Ricinus communis RepID=B9SWY0_RICCO 0.0
• FL-Next: sp=Transcription factor bHLH140; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene3679 SustainPine v3.0 4014
• AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 5'->3' exoribonuclease, putative 8.416e-16
Complete
sp_v3.0_unigene3712 SustainPine v3.0 1961
• AutoFact: mRNA adenosine methylase [Arabidopsis thaliana] sp|O82486.2|MTA70_ARATH RecName: Full=N6-adenosine-methyltransferase MT-A70-like; AltName: Full=Protein EMBRYO DEFECTIVE 1706 emb|CAB81177.1| putative methyltransferase [Arabidopsis thaliana] gb|AEE82925.1| 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene3989 SustainPine v3.0 1333
• AutoFact: 3'-5' exonuclease, putative n=1 Tax=Ricinus communis RepID=B9SDW9_RICCO 0.0
• FL-Next: tr=3'-5' exonuclease, putative; Ricinus communis (Castor bean). 0.0
• Sma3: RRP6-like protein 3 9.747e-06
C-terminus
sp_v3.0_unigene5626 SustainPine v3.0 1727
• AutoFact: Adenylate kinase family protein n=3 Tax=Arabidopsis RepID=Q8VYL1_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Adenylate kinase, putative 7.824e-09
C-terminus
sp_v3.0_unigene6225 SustainPine v3.0 2742
• AutoFact: PA domain containing protein 5.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Vacuolar-sorting receptor 1 1.039e-07
Putative Complete
sp_v3.0_unigene7349 SustainPine v3.0 2039
• AutoFact: Os01g0872700 protein n=3 Tax=Oryza sativa RepID=Q5N739_ORYSJ 0.0
• FL-Next: sp=5'-3' exoribonuclease 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: 5'->3' exoribonuclease, putative 2.293e-16
C-terminus
sp_v3.0_unigene8612 SustainPine v3.0 1367
• AutoFact: 3'-5' exonuclease, putative [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene9271 SustainPine v3.0 1388
• AutoFact: Uridylate kinase plant, putative n=1 Tax=Ricinus communis RepID=B9SKI0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Uridylate kinase 4.324e-14
Complete
sp_v3.0_unigene9831 SustainPine v3.0 2609
• AutoFact: Os01g0872700 protein n=3 Tax=Oryza sativa RepID=Q5N739_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 5'->3' exoribonuclease, putative 2.888e-16
Complete
sp_v3.0_unigene10173 SustainPine v3.0 256
• AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group] 5.0e-38
• FL-Next: sp=5'-3' exoribonuclease 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: 5'->3' exoribonuclease, putative 3.297e-16
Internal
sp_v3.0_unigene11394 SustainPine v3.0 1693
• AutoFact: adenosine kinase [Arabidopsis thaliana] sp|Q9ZUU1.1|KADC1_ARATH RecName: Full=Probable adenylate kinase 1, chloroplastic; Short=AK 1; AltName: Full=ATP-AMP transphosphorylase 1; Flags: Precursor gb|AAC98046.1| putative adenylate kinase [Arabidopsis thalia 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Adenylate kinase 7.004e-13
Complete
sp_v3.0_unigene11656 SustainPine v3.0 1401
• AutoFact: Probable adenylate kinase 2, chloroplastic n=2 Tax=Arabidopsis RepID=KADC2_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Adenylate kinase 7.161e-16
Complete
sp_v3.0_unigene12249 SustainPine v3.0 2561
• AutoFact: P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana] gb|AAY25445.1| At1g72040 [Arabidopsis thaliana] dbj|BAF00702.1| hypothetical protein [Arabidopsis thaliana] gb|AEE35266.1| P-loop containing nucleoside triphosphate hy 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene13903 SustainPine v3.0 662
• AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group] 0.0
• FL-Next: Isoform 2 of 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3 0.0
• Sma3: 5'->3' exoribonuclease, putative 6.254e-16
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain