Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleobase-containing compound metabolic process

Term: GO:0006139  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene34556 SustainPine v3.0 372
AutoFact: Os01g0872700 protein n=3 Tax=Oryza sativa RepID=Q5N739_ORYSJ 2.0e-35
FL-Next: Isoform 2 of 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3 0.0
Sma3: 5'->3' exoribonuclease, putative 4.786e-16
Internal
sp_v3.0_unigene35211 SustainPine v3.0 358
AutoFact: 5'->3' exoribonuclease, putative n=1 Tax=Ricinus communis RepID=B9RET3_RICCO 0.0
FL-Next: sp=5'-3' exoribonuclease 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: 5'->3' exoribonuclease, putative 3.297e-16
Internal
sp_v3.0_unigene37661 SustainPine v3.0 3746
AutoFact: Os01g0872700 protein n=3 Tax=Oryza sativa RepID=Q5N739_ORYSJ 0.0
FL-Next: sp=5'-3' exoribonuclease 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: 5'->3' exoribonuclease, putative 5.109e-16
Complete
sp_v3.0_unigene37804 SustainPine v3.0 1917
AutoFact: 5'->3' exoribonuclease, putative n=1 Tax=Ricinus communis RepID=B9R871_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 5'->3' exoribonuclease, putative 1.795e-16
Complete
sp_v3.0_unigene40332 SustainPine v3.0 465
AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene42137 SustainPine v3.0 161
AutoFact: regulator of telomere elongation helicase 1 [Arabidopsis thaliana] gb|AEE36333.1| regulator of telomere elongation helicase 1 [Arabidopsis thaliana] 4.0e-06
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene43284 SustainPine v3.0 189
AutoFact: DNA polymerase A family protein, putative n=3 Tax=Arabidopsis thaliana RepID=Q9C6J5_ARATH 1.0e-16
FL-Next: tr=DNA polymerase A family protein, putative; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative PolI-like DNA polymerase 1.745e-08
Internal
sp_v3.0_unigene44436 SustainPine v3.0 529
AutoFact: Polymyositis/scleroderma autoantigen 2-like n=1 Tax=Oryza sativa Japonica Group RepID=Q69RB5_ORYSJ 0.0
FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Internal
sp_v3.0_unigene44471 SustainPine v3.0 721
AutoFact: 3'-5' exonuclease, putative [Arabidopsis thaliana] 5.0e-40
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene44665 SustainPine v3.0 469
AutoFact: regulator of telomere elongation helicase 1 [Arabidopsis thaliana] gb|AEE36333.1| regulator of telomere elongation helicase 1 [Arabidopsis thaliana] 6.02558e-44
FL-Next: sp=DNA repair helicase UVH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene48224 SustainPine v3.0 818
AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene48644 SustainPine v3.0 338
AutoFact: DUF82 domain containing protein 7.0e-10
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
C-terminus
sp_v3.0_unigene49682 SustainPine v3.0 1430
AutoFact: 3'-5' exonuclease domain-containing protein n=3 Tax=Arabidopsis RepID=F4I526_ARATH 1.0e-08
FL-Next: tr=3'-5' exonuclease domain-containing protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene51650 SustainPine v3.0 157
AutoFact: 5'-3' exoribonuclease 3 [Arabidopsis thaliana] sp|Q9FQ03.1|XRN3_ARATH RecName: Full=5'-3' exoribonuclease 3; AltName: Full=Protein EXORIBONUCLEASE 3 gb|AAG40732.1|AF286719_1 XRN3 [Arabidopsis thaliana] gb|AEE35742.1| 5'-3' exoribonuclease 3 [Arabidopsis t 8.0e-12
FL-Next: Isoform 2 of 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3 0.0
Sma3: 5'->3' exoribonuclease, putative 4.798e-08
Internal
sp_v3.0_unigene52157 SustainPine v3.0 300
AutoFact: HRDC domain containing protein 4.0e-08
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene52583 SustainPine v3.0 116
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene53283 SustainPine v3.0 218
AutoFact: DNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7U238_VITVI 1.0e-16
FL-Next: sp=DNA polymerase; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: DNA polymerase 2.752e-09
N-terminus
sp_v3.0_unigene53581 SustainPine v3.0 400
AutoFact: Uridylate kinase plant, putative n=1 Tax=Ricinus communis RepID=B9SKI0_RICCO 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Uridylate kinase 5.942e-15
C-terminus
sp_v3.0_unigene55888 SustainPine v3.0 286
AutoFact: UMP/CMP kinase b [Oryza sativa Japonica Group] 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Uridylate kinase plant, putative 2.178e-12
Internal
sp_v3.0_unigene58195 SustainPine v3.0 409
AutoFact: regulator of telomere elongation helicase 1 [Arabidopsis thaliana] gb|AEE36333.1| regulator of telomere elongation helicase 1 [Arabidopsis thaliana] 1.0e-34
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain