Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleobase-containing compound metabolic process

Term: GO:0006139  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene14157 SustainPine v3.0 3918
• AutoFact: Exosome complex exonuclease RRP6 n=3 Tax=Arabidopsis RepID=A9LLI7_ARATH 0.0
• FL-Next: tr=Putative nucleolar protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative nucleolar protein 7.335e-08
Complete
sp_v3.0_unigene14437 SustainPine v3.0 543
• AutoFact: 3'-5' exonuclease domain-containing protein [Arabidopsis thaliana] dbj|BAB11227.1| unnamed protein product [Arabidopsis thaliana] gb|AAP21257.1| At5g24340 [Arabidopsis thaliana] dbj|BAE99637.1| hypothetical protein [Arabidopsis thaliana] gb|AED93295.1| 3' 2.0e-21
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene14542 SustainPine v3.0 743
• AutoFact: DNA polymerase A family protein, putative n=3 Tax=Arabidopsis thaliana RepID=Q9C6J5_ARATH 0.0
• FL-Next: tr=At1g50840/F8A12_8; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: PolI-like DNA polymerase 2.505e-08
Internal
sp_v3.0_unigene14757 SustainPine v3.0 560
• AutoFact: regulator of telomere elongation helicase 1 [Arabidopsis thaliana] gb|AEE36333.1| regulator of telomere elongation helicase 1 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene15861 SustainPine v3.0 1334
• AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 9.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene16042 SustainPine v3.0 1446
• AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene16726 SustainPine v3.0 791
• AutoFact: DUF82 domain containing protein 1.0e-34
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene19070 SustainPine v3.0 655
• AutoFact: Adenylate kinase n=2 Tax=Zea mays RepID=B6THB3_MAIZE 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Adenylate kinase 7.601e-07
C-terminus
sp_v3.0_unigene20082 SustainPine v3.0 2242
• AutoFact: guanylate kinase [Lilium longiflorum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanylate kinase 1.951e-30
Complete
sp_v3.0_unigene22301 SustainPine v3.0 421
• AutoFact: 5'-3' exoribonuclease 3 [Arabidopsis thaliana] sp|Q9FQ03.1|XRN3_ARATH RecName: Full=5'-3' exoribonuclease 3; AltName: Full=Protein EXORIBONUCLEASE 3 gb|AAG40732.1|AF286719_1 XRN3 [Arabidopsis thaliana] gb|AEE35742.1| 5'-3' exoribonuclease 3 [Arabidopsis t 0.0
• FL-Next: Isoform 2 of 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3 0.0
• Sma3: 5'->3' exoribonuclease, putative 6.254e-16
N-terminus
sp_v3.0_unigene22308 SustainPine v3.0 465
• AutoFact: RecName: Full=Adenylate kinase, chloroplastic; Short=AK; AltName: Full=ATP-AMP transphosphorylase pdb|1ZAK|A Chain A, Adenylate Kinase From Maize In Complex With The Inhibitor P1,P5-Bis(Adenosine-5'-)pentaphosphate (Ap5a) pdb|1ZAK|B Chain B, Adenylate Kin 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Adenylate kinase 7.161e-16
N-terminus
sp_v3.0_unigene22830 SustainPine v3.0 690
• AutoFact: aprataxin [Arabidopsis thaliana] sp|Q9M041.1|BH140_ARATH RecName: Full=Transcription factor bHLH140; AltName: Full=Basic helix-loop-helix protein 140; Short=AtbHLH140; Short=bHLH 140; AltName: Full=Transcription factor EN 122; AltName: Full=bHLH transcrip 5.0e-38
• FL-Next: sp=Transcription factor bHLH140; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene25224 SustainPine v3.0 1176
• AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group] 0.0
• FL-Next: Isoform 2 of 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3 0.0
• Sma3: 5'->3' exoribonuclease, putative 8.808e-16
N-terminus
sp_v3.0_unigene26442 SustainPine v3.0 660
• AutoFact: Uridylate kinase plant, putative n=1 Tax=Ricinus communis RepID=B9SKI0_RICCO 1.4013e-45
• FL-Next: sp=UMP/CMP kinase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Uridylate kinase 3.804e-14
Complete
sp_v3.0_unigene26461 SustainPine v3.0 299
• AutoFact: UMP-CMP kinase n=1 Tax=Glomerella graminicola M1.001 RepID=E3Q5Z6_COLGM 4.99997e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Flagellar adenylate kinase 2.212e-09
Internal
sp_v3.0_unigene27776 SustainPine v3.0 1464
• AutoFact: adenosine kinase [Arabidopsis thaliana] sp|Q9ZUU1.1|KADC1_ARATH RecName: Full=Probable adenylate kinase 1, chloroplastic; Short=AK 1; AltName: Full=ATP-AMP transphosphorylase 1; Flags: Precursor gb|AAC98046.1| putative adenylate kinase [Arabidopsis thalia 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Adenylate kinase 1.778e-12
Complete
sp_v3.0_unigene29622 SustainPine v3.0 1284
• AutoFact: Adenylate kinase B n=8 Tax=Magnoliophyta RepID=KAD2_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: cDNA clone:J033048N16, full insert sequence 0.0
Complete
sp_v3.0_unigene29752 SustainPine v3.0 2409
• AutoFact: 5'->3' exoribonuclease, putative n=1 Tax=Ricinus communis RepID=B9R871_RICCO 0.0
• FL-Next: sp=5'-3' exoribonuclease 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: 5'->3' exoribonuclease, putative 8.416e-16
N-terminus
sp_v3.0_unigene29943 SustainPine v3.0 4990
• AutoFact: methyltransferase-like protein 1 [Arabidopsis thaliana] emb|CAB39622.1| putative protein [Arabidopsis thaliana] emb|CAB78121.1| putative protein [Arabidopsis thaliana] gb|AEE82823.1| methyltransferase-like protein 1 [Arabidopsis thaliana] 0.0
• FL-Next: sp=Methyltransferase-like protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene34510 SustainPine v3.0 544
• AutoFact: Probable adenylate kinase 2, chloroplastic n=2 Tax=Arabidopsis RepID=KADC2_ARATH 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Adenylate kinase 6.181e-10
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain