|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
sp_v3.0_unigene164577
|
SustainPine v3.0
|
280
|
|
• AutoFact: Gag-Pol n=1 Tax=Ipomoea batatas RepID=Q6BCY1_IPOBA
|
6.0e-19
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
3.918e-17
|
|
Internal
|
|
sp_v3.0_unigene165363
|
SustainPine v3.0
|
461
|
|
• AutoFact: double-strand break repair protein MRE11 [Arabidopsis thaliana] sp|Q9XGM2.1|MRE11_ARATH RecName: Full=Double-strand break repair protein MRE11 emb|CAB50793.1| Mre11 protein [Arabidopsis thaliana] dbj|BAB10749.1| DNA repair and meiosis protein Mre11 [Arabi
|
0.0
|
|
• FL-Next: sp=Double-strand break repair protein MRE11; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Sma3: Mre11 DNA repair/recombination protein
|
1.336e-12
|
|
N-terminus
|
|
sp_v3.0_unigene165609
|
SustainPine v3.0
|
427
|
|
• AutoFact: Unassigned protein
|
1.0e-38
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
Internal
|
|
sp_v3.0_unigene165729
|
SustainPine v3.0
|
420
|
|
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QP36_ORYSJ
|
0.0
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
4.107e-36
|
|
Internal
|
|
sp_v3.0_unigene165858
|
SustainPine v3.0
|
537
|
|
• AutoFact: T26F17.17 n=1 Tax=Arabidopsis thaliana RepID=Q9SFE1_ARATH
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.208e-17
|
|
Internal
|
|
sp_v3.0_unigene166071
|
SustainPine v3.0
|
377
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco).
|
0.0
|
|
Putative C-terminus
|
|
sp_v3.0_unigene167029
|
SustainPine v3.0
|
183
|
|
• AutoFact: rve domain containing protein
|
2.0e-13
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.298e-12
|
|
Internal
|
|
sp_v3.0_unigene167445
|
SustainPine v3.0
|
205
|
|
• AutoFact: polynucleotidyl transferase, ribonuclease H-like protein [Arabidopsis thaliana] gb|AAG52378.1|AC011765_30 putative exonuclease; 20146-18080 [Arabidopsis thaliana] gb|AAM20568.1| putative exonuclease [Arabidopsis thaliana] gb|AAN15607.1| putative exonuclea
|
2.0e-10
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Sma3: Putative exonuclease
|
4.525e-08
|
|
Internal
|
|
sp_v3.0_unigene168038
|
SustainPine v3.0
|
353
|
|
• AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH
|
6.0e-27
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.503e-15
|
|
Internal
|
|
sp_v3.0_unigene182941
|
SustainPine v3.0
|
307
|
|
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY11_PICAB
|
1.0e-27
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.805e-33
|
|
Internal
|
|
sp_v3.0_unigene182993
|
SustainPine v3.0
|
877
|
|
• AutoFact: exonuclease family protein [Arabidopsis thaliana] ref|NP_851082.1| exonuclease family protein [Arabidopsis thaliana] ref|NP_851083.1| exonuclease family protein [Arabidopsis thaliana] ref|NP_974842.1| exonuclease family protein [Arabidopsis thaliana] dbj|
|
6.0e-25
|
|
• FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice).
|
0.0
|
|
Putative Complete
|
|
sp_v3.0_unigene184621
|
SustainPine v3.0
|
454
|
|
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA
|
5.0e-40
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
7.666e-08
|
|
C-terminus
|
|
sp_v3.0_unigene187666
|
SustainPine v3.0
|
174
|
|
• AutoFact: Meiotic recombination repair protein, putative n=1 Tax=Ricinus communis RepID=B9SIE0_RICCO
|
1.0e-17
|
|
• FL-Next: sp=Double-strand break repair protein MRE11; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Sma3: Double-strand break repair protein MRE11
|
5.097e-09
|
|
Internal
|
|
sp_v3.0_unigene189224
|
SustainPine v3.0
|
1142
|
|
• AutoFact: Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic n=1 Tax=Medicago truncatula RepID=Q2HU05_MEDTR
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Copia-type polyprotein
|
1.905e-11
|
|
Putative N-terminus
|
|
sp_v3.0_unigene189448
|
SustainPine v3.0
|
1166
|
|
• AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
4.02e-18
|
|
C-terminus
|
|
sp_v3.0_unigene193856
|
SustainPine v3.0
|
486
|
|
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE
|
1.0e-37
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
4.2039e-45
|
|
Internal
|
|
sp_v3.0_unigene196190
|
SustainPine v3.0
|
266
|
|
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SJT2_ARATH
|
5.0e-11
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
4.862e-16
|
|
Internal
|
|
sp_v3.0_unigene199004
|
SustainPine v3.0
|
448
|
|
• AutoFact: RVT_2 domain containing protein
|
8.00001e-42
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Sma3: Reverse transcriptase
|
0.0
|
|
Internal
|
|
sp_v3.0_unigene199445
|
SustainPine v3.0
|
526
|
|
• AutoFact: RVT_2 domain containing protein
|
0.0
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.465e-26
|
|
Internal
|
|
sp_v3.0_unigene200651
|
SustainPine v3.0
|
357
|
|
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY09_PICAB
|
3.0e-19
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
9.288e-16
|
|
Internal
|
