Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Chromosome chr14 scaffold_27, whole genome shotgun sequence

Source: Description from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene13361 SustainPine v3.0 1697
• AutoFact: D111/G-patch; Zinc finger, C2H2-type [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr14 scaffold_27, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene22591 SustainPine v3.0 1260
• AutoFact: uncharacterized protein [Arabidopsis thaliana] ref|XP_002892500.1| hypothetical protein ARALYDRAFT_471024 [Arabidopsis lyrata subsp. lyrata] sp|Q8LEK2.1|FA18_ARATH RecName: Full=Uncharacterized FAM18-like protein At1g09330 gb|AAM62608.1| unknown [Arabidop 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr14 scaffold_27, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene29003 SustainPine v3.0 1007
• AutoFact: ABC transporter I family member 20 [Arabidopsis thaliana] sp|Q9LZ98.1|AB20I_ARATH RecName: Full=ABC transporter I family member 20; Short=ABC transporter ABCI.20; Short=AtABCI20; AltName: Full=GCN-related protein 3; AltName: Full=Non-intrinsic ABC protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr14 scaffold_27, whole genome shotgun sequence 0.0
N-terminus
sp_v3.0_unigene37268 SustainPine v3.0 427
• AutoFact: MtN3_slv domain containing protein 6.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr14 scaffold_27, whole genome shotgun sequence 1.182e-08
Internal
sp_v3.0_unigene63751 SustainPine v3.0 174
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr14 scaffold_27, whole genome shotgun sequence 7.811e-06
Internal
sp_v3.0_unigene66259 SustainPine v3.0 398
• AutoFact: phloem-specific lectin PP2-like protein [Arabidopsis thaliana] 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr14 scaffold_27, whole genome shotgun sequence 1.716e-08
N-terminus
sp_v3.0_unigene99307 SustainPine v3.0 567
• AutoFact: PREDICTED: similar to Tetratricopeptide-like helical n=1 Tax=Vitis vinifera RepID=UPI0001984A05 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr14 scaffold_27, whole genome shotgun sequence 2.89e-10
Internal
sp_v3.0_unigene132955 SustainPine v3.0 489
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr14 scaffold_27, whole genome shotgun sequence 1.707e-07
Internal
sp_v3.0_unigene149898 SustainPine v3.0 366
• AutoFact: phloem-specific lectin PP2-like protein [Arabidopsis thaliana] 8.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr14 scaffold_27, whole genome shotgun sequence 5.383e-08
N-terminus
sp_v3.0_unigene206643 SustainPine v3.0 450
• AutoFact: Germin-like protein 2 (Fragment) n=2 Tax=Picea abies RepID=Q4VSU6_PICAB 8.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr14 scaffold_27, whole genome shotgun sequence 3.959e-14
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain