Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: plastid

Term: GO:0009536  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene25351 SustainPine v3.0 543
• AutoFact: 30S ribosomal protein S12 n=2 Tax=Pyrenophora RepID=B2WGH1_PYRTR 0.0
• FL-Next: sp=30S ribosomal protein S12, chloroplastic; Keteleeria davidiana (David's keteleeria) (Pseudotsuga davidiana). Plastid; Chloroplast. 0.0
• Sma3: Ribosomal protein S12 0.0
Putative Complete
sp_v3.0_unigene25526 SustainPine v3.0 629
• AutoFact: Chaperone protein dnaJ, putative n=1 Tax=Ricinus communis RepID=B9SSF5_RICCO 0.0
• FL-Next: sp=Chaperone protein dnaJ 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Chaperone protein dnaJ 13 1.656e-09
Internal
sp_v3.0_unigene25542 SustainPine v3.0 539
• AutoFact: [D] COG0206 Cell division GTPase 8.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Plastid division protein FtsZ 1.369e-19
Putative N-terminus
sp_v3.0_unigene25739 SustainPine v3.0 724
• AutoFact: ATP synthase subunit beta n=1 Tax=Polytomella sp. Pringsheim 198.80 RepID=A0ZW41_9CHLO 0.0
• FL-Next: sp=ATP synthase subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP synthase subunit beta 7.674e-12
C-terminus
sp_v3.0_unigene26399 SustainPine v3.0 639
• AutoFact: 30S ribosomal protein S11 n=4 Tax=cellular organisms RepID=RS11_FLAJ1 0.0
• FL-Next: sp=30S ribosomal protein S11, chloroplastic; Pseudotsuga sinensis var. wilsoniana. Plastid; Chloroplast. 0.0
• Sma3: 30S ribosomal protein S11, chloroplastic 0.0
Complete
sp_v3.0_unigene26915 SustainPine v3.0 1326
• AutoFact: [J] COG0093 Ribosomal protein L14 6.0e-28
• FL-Next: sp=50S ribosomal protein L14, chloroplastic; Abies firma (Momi fir). Plastid; Chloroplast. 0.0
• Sma3: 50S ribosomal protein L14, chloroplastic 0.0
Complete
sp_v3.0_unigene27194 SustainPine v3.0 705
• AutoFact: 50S ribosomal protein L2 n=6 Tax=cellular organisms RepID=RL2_FLAJ1 0.0
• FL-Next: sp=30S ribosomal protein S19, chloroplastic; Pinus aristata. Plastid; Chloroplast. 0.0
• Sma3: 50S ribosomal protein L2, chloroplastic 0.0
Putative Complete
sp_v3.0_unigene27436 SustainPine v3.0 450
• AutoFact: 50S ribosomal protein L16 n=4 Tax=Flavobacteriales RepID=RL16_FLAJ1 5.0e-34
• FL-Next: sp=50S ribosomal protein L16, chloroplastic; Pinus taeda (Loblolly pine). Plastid; Chloroplast. 0.0
• Sma3: 50S ribosomal protein L16, chloroplastic 0.0
C-terminus
sp_v3.0_unigene28218 SustainPine v3.0 985
• AutoFact: Ethylene-responsive element binding factor-like protein n=5 Tax=Picea sitchensis RepID=E0ZGY9_PICSI 3.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 7.524e-33
Complete
sp_v3.0_unigene28326 SustainPine v3.0 730
• AutoFact: DUF1279 domain containing protein 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene28420 SustainPine v3.0 751
• AutoFact: Phosphate transporter n=1 Tax=Lotus japonicus RepID=Q1T6Z8_LOTJA 4.00001e-40
• FL-Next: tr=Putative phosphate transporter; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: H(+)/Pi cotransporter 0.0
C-terminus
sp_v3.0_unigene28519 SustainPine v3.0 631
• AutoFact: ATP synthase subunit beta n=2 Tax=Bacillariophyta RepID=B7FS46_PHATC 0.0
• FL-Next: sp=ATP synthase subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP synthase subunit beta 1.176e-10
C-terminus
sp_v3.0_unigene29322 SustainPine v3.0 464
• AutoFact: Ethylene response factor 6a n=2 Tax=Nicotiana tabacum RepID=E7FKW2_TOBAC 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 2.088e-33
N-terminus
sp_v3.0_unigene29333 SustainPine v3.0 499
• AutoFact: Palmitoyl-ACP thioesterase n=3 Tax=Elaeis guineensis RepID=Q1W7L7_ELAGV 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl-ACP thioesterase 0.0
Internal
sp_v3.0_unigene29985 SustainPine v3.0 2518
• AutoFact: BHLH transcription factor PTF1-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q6EPZ6_ORYSJ 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: BHLH transcription factor GBOF-1 6.026e-10
Complete
sp_v3.0_unigene30190 SustainPine v3.0 1025
• AutoFact: Glutathione peroxidase (Fragment) n=20 Tax=Picea sitchensis RepID=E5F5S9_PICSI 0.0
• FL-Next: sp=Probable phospholipid hydroperoxide glutathione peroxidase; Citrus sinensis (Sweet orange) (Citrus aurantium var. sinensis). 0.0
• Sma3: Glutathione peroxidase 0.0
Complete
sp_v3.0_unigene30965 SustainPine v3.0 836
• AutoFact: Glutathione peroxidase (Fragment) n=20 Tax=Picea sitchensis RepID=E5F5S9_PICSI 0.0
• FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione peroxidase 0.0
Complete
sp_v3.0_unigene31298 SustainPine v3.0 684
• AutoFact: Glutathione peroxidase n=1 Tax=Candida glabrata CBS 138 RepID=Q6FWZ5_CANGA 0.0
• FL-Next: sp=Probable phospholipid hydroperoxide glutathione peroxidase; Citrus sinensis (Sweet orange) (Citrus aurantium var. sinensis). 0.0
• Sma3: Glutathione peroxidase 0.0
Complete
sp_v3.0_unigene31621 SustainPine v3.0 859
• AutoFact: Ethylene-responsive element binding factor-like protein n=5 Tax=Picea sitchensis RepID=E0ZGY9_PICSI 0.0
• FL-Next: tr=Ethylene-responsive element binding factor-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 0.0
Complete
sp_v3.0_unigene31786 SustainPine v3.0 1658
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9R919_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Similarity to AAA-type ATPase 1.39e-23
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain