Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: plastid

Term: GO:0009536  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene142813 SustainPine v3.0 205
• AutoFact: Phophate translocator (Fragment) n=1 Tax=Beta vulgaris subsp. vulgaris RepID=Q9SPH6_BETVU 4.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: cTPT 3.464e-24
Putative C-terminus
sp_v3.0_unigene142953 SustainPine v3.0 593
• AutoFact: Fiber protein Fb15 n=1 Tax=Gossypium barbadense RepID=Q7X9S5_GOSBA 2.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fiber protein Fb15 3.292e-10
Putative Complete
sp_v3.0_unigene142965 SustainPine v3.0 406
• AutoFact: Putative phosphate transporter n=1 Tax=Cryptomeria japonica RepID=Q1XG57_CRYJA 4.0e-25
• FL-Next: tr=Putative phosphate transporter; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: H(+)/Pi cotransporter 0.0
N-terminus
sp_v3.0_unigene143197 SustainPine v3.0 1113
• AutoFact: 1-deoxy-D-xylulose 5-phosphate synthase type II n=3 Tax=Pinaceae RepID=A7LA01_PICAB 0.0
• FL-Next: tr=Putative 1-D-deoxyxylulose 5-phosphate synthase type 2; Pinus densiflora (Japanese red pine). 0.0
• Sma3: 1-deoxy-D-xylulose-5-phosphate synthase 1.254e-36
Internal
sp_v3.0_unigene144283 SustainPine v3.0 646
• AutoFact: Phospholipase D n=5 Tax=Gossypium RepID=B5B3R1_GOSAR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phospholipase D 1.552e-34
C-terminus
sp_v3.0_unigene144359 SustainPine v3.0 615
• AutoFact: Phospholipase D n=1 Tax=Citrus sinensis RepID=B2L042_CITSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phospholipase D 8.355e-30
C-terminus
sp_v3.0_unigene145360 SustainPine v3.0 389
• AutoFact: Glutathione peroxidase-like protein (Fragment) n=10 Tax=Picea sitchensis RepID=E0Z6W2_PICSI 3.0e-38
• FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione peroxidase 0.0
C-terminus
sp_v3.0_unigene146139 SustainPine v3.0 888
• AutoFact: ADP-ribosylation factor [Hyacinthus orientalis] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ADP-ribosylation factor 1.015e-26
Putative Complete
sp_v3.0_unigene146348 SustainPine v3.0 333
• AutoFact: ADP-ribosylation factor A1E [Arabidopsis thaliana] ref|NP_001190161.1| ADP-ribosylation factor A1E [Arabidopsis thaliana] ref|NP_001190162.1| ADP-ribosylation factor A1E [Arabidopsis thaliana] ref|XP_002880284.1| ADP-ribosylation factor A1E [Arabidopsis l 6.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ADP-ribosylation factor, arf, putative 2.091e-14
C-terminus
sp_v3.0_unigene148833 SustainPine v3.0 390
• AutoFact: Glutathione peroxidase (Fragment) n=20 Tax=Picea sitchensis RepID=E5F5S9_PICSI 9.94922e-44
• FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione peroxidase 0.0
Internal
sp_v3.0_unigene149323 SustainPine v3.0 327
• AutoFact: [GEPR] COG0477 Permeases of the major facilitator superfamily 6.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene149685 SustainPine v3.0 220
• AutoFact: Photosystem I reaction center subunit iv b (Fragment) n=1 Tax=Camellia sinensis RepID=F4YFK2_CAMSI 2.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Photosystem I reaction center subunit IV A 5.415e-12
C-terminus
sp_v3.0_unigene149999 SustainPine v3.0 144
• AutoFact: Putative phosphate transporter n=1 Tax=Cryptomeria japonica RepID=Q1XG57_CRYJA 3.0e-18
• FL-Next: tr=Putative phosphate transporter; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: Phosphate transporter 0.0
Internal
sp_v3.0_unigene150213 SustainPine v3.0 331
• AutoFact: PREDICTED: similar to ADP-ribosylation factor n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000586367 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ADP-ribosylation factor 3.369e-19
Putative C-terminus
sp_v3.0_unigene150649 SustainPine v3.0 372
• AutoFact: Elongation factor Tu n=1 Tax=alpha proteobacterium BAL199 RepID=A8TWG4_9PROT 0.0
• FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor Tu 0.0
Putative C-terminus
sp_v3.0_unigene150797 SustainPine v3.0 204
• AutoFact: Elongation factor Tu n=5 Tax=Flavobacteriales RepID=EFTU_FLAJ1 5.0e-18
• FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: EF-Tu 0.0
Internal
sp_v3.0_unigene150940 SustainPine v3.0 327
• AutoFact: Ribulose bisphosphate carboxylase large chain n=118 Tax=Eukaryota RepID=RBL_BRYMA 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase large chain; Araucaria cunninghamii (Hoop pine) (Moreton Bay pine). Plastid; Chloroplast. 0.0
• Sma3: RuBisCO large subunit 2.012e-11
Putative N-terminus
sp_v3.0_unigene151085 SustainPine v3.0 354
• AutoFact: 50S ribosomal protein L5 n=1 Tax=Chlorobium limicola DSM 245 RepID=RL5_CHLL2 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 50S ribosomal protein L5, chloroplastic 0.0
Putative C-terminus
sp_v3.0_unigene151096 SustainPine v3.0 450
• AutoFact: Elongation factor Tu 1 n=2 Tax=Taylorella equigenitalis MCE9 RepID=E8UFB1_TAYEM 6.0e-33
• FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor Tu 4.509e-40
C-terminus
sp_v3.0_unigene151299 SustainPine v3.0 299
• AutoFact: 30S ribosomal protein S11 n=5 Tax=Betaproteobacteria RepID=RS11_AZOSB 8.0e-40
• FL-Next: sp=30S ribosomal protein S11, chloroplastic; Larix decidua (European larch). Plastid; Chloroplast. 0.0
• Sma3: 30S ribosomal protein S11, chloroplastic 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain