Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast stroma

Term: GO:0009570  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene207740 SustainPine v3.0 653
AutoFact: Uroporphyrinogen decarboxylase n=1 Tax=Ricinus communis RepID=B9SGB6_RICCO 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Uroporphyrinogen decarboxylase 4.153e-10
C-terminus
sp_v3.0_unigene207795 SustainPine v3.0 531
AutoFact: Glutaredoxin n=2 Tax=Ricinus communis RepID=GLRX_RICCO 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutaredoxin 6.914e-31
Putative Complete
sp_v3.0_unigene207910 SustainPine v3.0 369
AutoFact: Tau class glutathione S-transferase n=2 Tax=Pinus RepID=D3YLT8_9CONI 1.96182e-44
FL-Next: tr=Tau class glutathione S-transferase; Pinus brutia. 0.0
Sma3: Glutathione s-transferase, putative 2.64986e-42
Putative N-terminus
sp_v3.0_unigene207929 SustainPine v3.0 348
AutoFact: leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] gb|AAG28814.1|AC079374_17 unknown protein [Arabidopsis thaliana] gb|AAL08297.1| At1g25320/F4F7_17 [Arabidopsis thaliana] gb|AAQ65094.1| At1g25320/F4F7_17 [Arabidopsis thaliana] gb|ACN5 1.0e-31
FL-Next: tr=Somatic embryogenesis receptor-like kinase 1; Araucaria angustifolia. 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 2.201e-12
Internal
sp_v3.0_unigene208028 SustainPine v3.0 240
AutoFact: Acetohydroxyacid isomeroreductase n=1 Tax=Glycine max RepID=D2DKE6_SOYBN 3.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ketol-acid reductoisomerase 1.611e-14
Internal
sp_v3.0_unigene208393 SustainPine v3.0 389
AutoFact: enoyl-ACP reductase [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Enoyl-ACP reductase 7.568e-28
Internal
sp_v3.0_unigene208473 SustainPine v3.0 669
AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Complete
sp_v3.0_unigene208497 SustainPine v3.0 382
AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Putative C-terminus
sp_v3.0_unigene208511 SustainPine v3.0 471
AutoFact: RuBisCO subunit binding-protein beta subunit precursor [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RuBisCO large subunit-binding protein subunit beta, chloroplastic 2.34e-10
C-terminus
sp_v3.0_unigene208542 SustainPine v3.0 703
AutoFact: Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gb|AAL38267.1| unknown protein [Arabidopsis thaliana] gb|AAM47876.1| unknown protein [Arabidopsis thaliana] gb|AEC09632.1| Rossmann-fold NAD(P)-binding domain-containing protein 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene208608 SustainPine v3.0 473
AutoFact: Iron-sulfur assembly protein IscA [Arabidopsis thaliana] sp|Q9XIK3.2|ISCAP_ARATH RecName: Full=Iron-sulfur assembly protein IscA, chloroplastic; AltName: Full=Plastid SufA-like protein; AltName: Full=Protein scaffold protein AtCpIscA; Flags: Precursor gb| 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Iron-sulfur assembly protein IscA 5.707e-09
N-terminus
sp_v3.0_unigene208626 SustainPine v3.0 526
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene208688 SustainPine v3.0 376
AutoFact: Superoxide dismutase [Cu-Zn] n=2 Tax=Pinus sylvestris RepID=Q9AR80_PINSY 1.0e-22
FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
Sma3: Superoxide dismutase [Cu-Zn] 0.0
C-terminus
sp_v3.0_unigene208783 SustainPine v3.0 246
AutoFact: RuBisCO large subunit-binding protein subunit beta, chloroplastic n=6 Tax=core eudicotyledons RepID=RUBB_PEA 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RuBisCO large subunit-binding protein subunit beta, chloroplastic 3.515e-11
Internal
sp_v3.0_unigene208960 SustainPine v3.0 763
AutoFact: cold-related protein Cor413 [Gossypium barbadense] gb|ABI97481.1| COR413-like protein [Gossypium barbadense] 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cold acclimation protein WCOR413-like protein 4.994e-17
Putative Complete
sp_v3.0_unigene209019 SustainPine v3.0 366
AutoFact: Lipoxygenase n=1 Tax=Corylus avellana RepID=Q93YI8_CORAV 9.80909e-45
FL-Next: sp=Lipoxygenase; Taxus wallichiana var. chinensis (Chinese yew) (Taxus chinensis). 0.0
Sma3: Lipoxygenase 0.0
Internal
sp_v3.0_unigene209121 SustainPine v3.0 560
AutoFact: RuBisCO subunit binding-protein beta subunit (Fragment) n=1 Tax=Arabidopsis thaliana RepID=Q56ZP2_ARATH 9.80909e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RuBisCO large subunit-binding protein subunit beta, chloroplastic 1.148e-10
C-terminus
sp_v3.0_unigene209174 SustainPine v3.0 705
AutoFact: putative glutathione S-transferase OsGSTF3 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione S-transferase 1.10703e-43
Putative Complete
sp_v3.0_unigene209201 SustainPine v3.0 631
AutoFact: Peptidyl-prolyl cis-trans isomerase n=4 Tax=Pinaceae RepID=C9EGT5_9CONI 3.00018e-42
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
C-terminus
sp_v3.0_unigene209304 SustainPine v3.0 369
AutoFact: PREDICTED: similar to ferritin n=2 Tax=Hydra magnipapillata RepID=UPI0001926350 2.0e-28
FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ferritin 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain