Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast stroma

Term: GO:0009570  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene191178 SustainPine v3.0 434
• AutoFact: PREDICTED: glucan (1,4-alpha-), branching enzyme 1-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBA1CF 1.00053e-42
• FL-Next: Isoform 2 of 1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SBE1 0.0
• Sma3: Starch branching enzyme I 3.535e-18
Internal
sp_v3.0_unigene191232 SustainPine v3.0 409
• AutoFact: 60 kDa chaperonin n=5 Tax=Bifidobacteriaceae RepID=CH60_PARDN 3.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RuBisCO large subunit-binding protein subunit alpha, chloroplastic 1.114e-15
C-terminus
sp_v3.0_unigene191307 SustainPine v3.0 491
• AutoFact: Cyclophilin n=1 Tax=Loa loa RepID=E1G2L1_LOALO 2.0e-29
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Putative C-terminus
sp_v3.0_unigene191440 SustainPine v3.0 436
• AutoFact: DnaK protein (Fragment) n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CEM2_9PLAN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 0.0
Internal
sp_v3.0_unigene191445 SustainPine v3.0 456
• AutoFact: Delta-aminolevulinic acid dehydratase (Fragment) n=1 Tax=Bigelowiella natans RepID=Q7XYK3_BIGNA 1.0e-32
• FL-Next: sp=Delta-aminolevulinic acid dehydratase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Delta-aminolevulinic acid dehydratase 0.0
C-terminus
sp_v3.0_unigene191540 SustainPine v3.0 500
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Metarhizium acridum CQMa 102 RepID=E9E173_METAQ 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Putative Complete
sp_v3.0_unigene191558 SustainPine v3.0 393
• AutoFact: Phosphorylase n=2 Tax=Zea mays RepID=B5AMJ9_MAIZE 9.0e-24
• FL-Next: sp=Phosphorylase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phosphorylase 1.12104e-44
Putative C-terminus
sp_v3.0_unigene191568 SustainPine v3.0 417
• AutoFact: Elongation factor Tu, chloroplastic n=4 Tax=Chattonellaceae RepID=B2XTC8_HETA2 0.0
• FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor Tu 0.0
Internal
sp_v3.0_unigene191583 SustainPine v3.0 395
• AutoFact: Ferritin-1, chloroplastic n=2 Tax=Brassica RepID=FRI1_BRANA 2.0e-27
• FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ferritin 0.0
Internal
sp_v3.0_unigene191673 SustainPine v3.0 471
• AutoFact: Glutathione peroxidase n=8 Tax=Rhipicephalinae RepID=Q2XW15_BOOMI 0.0
• FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione peroxidase 0.0
N-terminus
sp_v3.0_unigene191833 SustainPine v3.0 625
• AutoFact: Ribulose bisphosphate carboxylase small chain n=1 Tax=Ankistrodesmus convolutus RepID=C4P6Y2_9CHLO 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Putative Complete
sp_v3.0_unigene192016 SustainPine v3.0 554
• AutoFact: Superoxide dismutase n=1 Tax=Acanthamoeba castellanii RepID=Q5IZD9_ACACA 0.0
• FL-Next: sp=Superoxide dismutase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Superoxide dismutase 0.0
C-terminus
sp_v3.0_unigene192070 SustainPine v3.0 240
• AutoFact: Peptidyl-prolyl cis-trans isomerase B n=1 Tax=Dictyostelium discoideum RepID=PPIB_DICDI 3.0e-16
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
N-terminus
sp_v3.0_unigene192805 SustainPine v3.0 337
• AutoFact: aminopeptidase P [Coprinopsis cinerea okayama7#130] gb|EAU82877.1| aminopeptidase P [Coprinopsis cinerea okayama7#130] 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Xaa-Pro aminopeptidase 1 3.741e-09
C-terminus
sp_v3.0_unigene192814 SustainPine v3.0 372
• AutoFact: molecular chaperone DnaK [Mesorhizobium sp. BNC1] sp|Q11KJ6.1|DNAK_MESSB RecName: Full=Chaperone protein DnaK; AltName: Full=HSP70; AltName: Full=Heat shock 70 kDa protein; AltName: Full=Heat shock protein 70 gb|ABG62079.1| chaperone protein DnaK [Chelati 9.99967e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 0.0
Putative N-terminus
sp_v3.0_unigene192866 SustainPine v3.0 612
• AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IM72_AZOC5 1.4013e-45
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
C-terminus
sp_v3.0_unigene192890 SustainPine v3.0 484
• AutoFact: Probable membrane protein YCR013c-yeast (ISS) n=1 Tax=Ostreococcus tauri RepID=Q017S2_OSTTA 7.0e-13
• FL-Next: sp=Phosphoglycerate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phosphoglycerate kinase 0.0
C-terminus
sp_v3.0_unigene192974 SustainPine v3.0 473
• AutoFact: Superoxide dismutase n=1 Tax=Grosmannia clavigera kw1407 RepID=F0XK55_GROCL 0.0
• FL-Next: sp=Superoxide dismutase [Cu-Zn]; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Superoxide dismutase [Cu-Zn] 0.0
C-terminus
sp_v3.0_unigene193087 SustainPine v3.0 451
• AutoFact: PREDICTED: peroxiredoxin-4-like n=1 Tax=Monodelphis domestica RepID=UPI0000F2CC59 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thioredoxin peroxidase 5.284e-16
C-terminus
sp_v3.0_unigene193258 SustainPine v3.0 511
• AutoFact: Acetyl-coenzyme A synthetase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=ACSA_GEMAT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acetyl CoA synthetase 4.649e-16
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain