Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast stroma

Term: GO:0009570  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene160938 SustainPine v3.0 387
AutoFact: Putative 9-cis-epoxycarotenoid dioxygenase n=9 Tax=Cupressaceae RepID=Q0EEH1_TAXDI 1.0e-36
FL-Next: tr=Putative 9-cis-epoxycarotenoid dioxygenase; Taxodium distichum (Bald cypress) (Cupressus disticha). 0.0
Sma3: 9-cis-epoxycarotenoid dioxygenase 9.51103e-41
Internal
sp_v3.0_unigene161479 SustainPine v3.0 334
AutoFact: Dihydroxy-acid dehydratase n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QSU5_SPILD 9.00054e-42
FL-Next: tr=Acetohydroxyacid dehydratase; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Putative C-terminus
sp_v3.0_unigene161697 SustainPine v3.0 319
AutoFact: Glutathione peroxidase n=1 Tax=Paramecium tetraurelia RepID=A0CYK6_PARTE 8.0e-22
FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione peroxidase 0.0
N-terminus
sp_v3.0_unigene161789 SustainPine v3.0 457
AutoFact: alanine aminotransferase [Oryza sativa Indica Group] 4.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alanine aminotransferase 2 1.048e-07
Putative N-terminus
sp_v3.0_unigene161875 SustainPine v3.0 319
AutoFact: Superoxide dismutase n=1 Tax=Ginkgo biloba RepID=B8YNX9_GINBI 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Superoxide dismutase 3.819e-14
N-terminus
sp_v3.0_unigene162051 SustainPine v3.0 179
AutoFact: Vitamin-b12 independent methionine synthase, 5-methyltetrahydropteroyltriglutamate-homocysteine n=2 Tax=Populus trichocarpa RepID=B9I615_POPTR 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Methionine synthase 9.214e-22
Putative N-terminus
sp_v3.0_unigene162165 SustainPine v3.0 334
AutoFact: Monodehydroascorbate reductase n=1 Tax=Rheum australe RepID=Q0GA76_RHEAU 1.99965e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Monodehydroascorbate reductase 0.0
Internal
sp_v3.0_unigene162344 SustainPine v3.0 333
AutoFact: monodehydroascorbate reductase [Brassica juncea] 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Monodehydroascorbate reductase 3.41e-17
Internal
sp_v3.0_unigene162613 SustainPine v3.0 386
AutoFact: Annexin n=1 Tax=Gossypium hirsutum RepID=D2D2Z9_GOSHI 2.0e-25
FL-Next: sp=Annexin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Annexin 2.836e-18
Internal
sp_v3.0_unigene162690 SustainPine v3.0 424
AutoFact: Protein translocase subunit secA n=1 Tax=Ricinus communis RepID=B9S2U6_RICCO 0.0
FL-Next: sp=Protein translocase subunit SECA2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Protein translocase subunit secA 0.0
Internal
sp_v3.0_unigene162992 SustainPine v3.0 396
AutoFact: peptide methionine sulfoxide reductase msrB [Neurospora crassa OR74A] gb|EAA28294.1| peptide methionine sulfoxide reductase msrB [Neurospora crassa OR74A] 6.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Methionine sulfoxide reductase type 2.77e-14
C-terminus
sp_v3.0_unigene163210 SustainPine v3.0 306
AutoFact: Adenylosuccinate synthetase n=1 Tax=Picea sitchensis RepID=D5A8A1_PICSI 1.0e-32
FL-Next: sp=Adenylosuccinate synthetase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Adenylosuccinate synthetase 0.0
Internal
sp_v3.0_unigene163323 SustainPine v3.0 245
AutoFact: Superoxide dismutase n=1 Tax=Ginkgo biloba RepID=B8YNX9_GINBI 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Superoxide dismutase 0.0
Putative N-terminus
sp_v3.0_unigene163621 SustainPine v3.0 420
AutoFact: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Solenostemon scutellarioides RepID=METE_SOLSC 0.0
FL-Next: tr=Vitamin-b12 independent methionine synthase; Pinus pinaster (Maritime pine). 0.0
Sma3: Cobalamin-independent methionine synthase 9.102e-24
C-terminus
sp_v3.0_unigene163666 SustainPine v3.0 366
AutoFact: Thioredoxin reductase n=1 Tax=Picea sitchensis RepID=B8LRB6_PICSI 1.4013e-45
FL-Next: sp=Thioredoxin reductase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Thioredoxin reductase 7.197e-39
C-terminus
sp_v3.0_unigene163980 SustainPine v3.0 266
AutoFact: ClpB [Phaseolus lunatus] 4.0e-27
FL-Next: sp=Chaperone protein ClpB3, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Chaperone clpb, putative 7.374e-08
Internal
sp_v3.0_unigene164106 SustainPine v3.0 114
AutoFact: Isoamylase isoform 3 n=1 Tax=Solanum tuberosum RepID=Q84YG5_SOLTU 6.0e-12
FL-Next: sp=Isoamylase 3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Isoamylase isoform 3 8.233e-09
Internal
sp_v3.0_unigene164229 SustainPine v3.0 290
AutoFact: putative dihydrolipoamide S-acetyltransferase [Arabidopsis thaliana] 7.0e-19
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Sma3: Dihydrolipoyllysine-residue acetyltransferase component of pyruvatedehydrogenase complex 2.101e-07
Internal
sp_v3.0_unigene164397 SustainPine v3.0 238
AutoFact: RecName: Full=Alpha-glucan water dikinase, chloroplastic; AltName: Full=Starch-related R1 protein; Flags: Precursor emb|CAA70725.1| R1 [Solanum tuberosum] 1.0e-27
FL-Next: sp=Alpha-glucan water dikinase, chloroplastic; Solanum tuberosum (Potato). 0.0
Sma3: Glucan water dikinase 6.584e-09
Internal
sp_v3.0_unigene164749 SustainPine v3.0 133
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain