Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: chloroplast stroma

Term: GO:0009570  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene158765 SustainPine v3.0 428
• AutoFact: Peptidyl-prolyl cis-trans isomerase CYP20-1 n=2 Tax=Arabidopsis RepID=CP20A_ARATH 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Putative C-terminus
sp_v3.0_unigene158895 SustainPine v3.0 234
• AutoFact: Similar to peroxiredoxin n=1 Tax=Leptosphaeria maculans RepID=E4ZUB0_LEPMC 3.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thioredoxin peroxidase 1.358e-16
Internal
sp_v3.0_unigene159102 SustainPine v3.0 265
• AutoFact: glycine-rich RNA-binding protein 2 [Aspergillus oryzae RIB40] ref|XP_002376652.1| heterogeneous nuclear ribonucleoprotein G, putative [Aspergillus flavus NRRL3357] dbj|BAE58923.1| unnamed protein product [Aspergillus oryzae RIB40] gb|EED53406.1| heterogen 1.0e-21
• FL-Next: tr=Glycine-rich RNA-binding protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Glycine-rich RNA-binding protein 7.776e-30
N-terminus
sp_v3.0_unigene159130 SustainPine v3.0 358
• AutoFact: Ferredoxin, chloroplastic n=3 Tax=Chlamydomonas RepID=FER_CHLRE 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ferredoxin 0.0
N-terminus
sp_v3.0_unigene159150 SustainPine v3.0 359
• AutoFact: Fructose-bisphosphatase, putative n=3 Tax=Filobasidiella/Cryptococcus neoformans species complex RepID=E6QZT7_CRYGW 1.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-1,6-bisphosphatase 0.0
C-terminus
sp_v3.0_unigene159191 SustainPine v3.0 348
• AutoFact: Carbamoyl-phosphate synthase, large subunit n=3 Tax=Flavobacteriales RepID=A5FNT7_FLAJ1 0.0
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene159217 SustainPine v3.0 314
• AutoFact: Triosephosphate isomerase, cytosolic n=8 Tax=Poaceae RepID=TPIS_MAIZE 2.0e-28
• FL-Next: sp=Triosephosphate isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Triosephosphate isomerase 0.0
N-terminus
sp_v3.0_unigene159245 SustainPine v3.0 288
• AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Cyanidium caldarium RepID=Q9M634_CYACA 4.0e-24
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
C-terminus
sp_v3.0_unigene159339 SustainPine v3.0 302
• AutoFact: [O] COG0450 Peroxiredoxin 1.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 2-cys peroxiredoxin-like protein 7.91e-09
Internal
sp_v3.0_unigene159381 SustainPine v3.0 308
• AutoFact: Malate dehydrogenase n=1 Tax=Tetrahymena thermophila SB210 RepID=Q22MV4_TETTH 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Malate dehydrogenase [NADP], chloroplastic 1.047e-22
Internal
sp_v3.0_unigene159392 SustainPine v3.0 164
• AutoFact: Dihydrolipoamide dehydrogenase, putative n=1 Tax=Ricinus communis RepID=B9RZN2_RICCO 7.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dihydrolipoyl dehydrogenase 0.0
Internal
sp_v3.0_unigene159665 SustainPine v3.0 339
• AutoFact: RecName: Full=Phosphoglucomutase, chloroplastic; Short=PGM; AltName: Full=Glucose phosphomutase; Flags: Precursor emb|CAB60109.1| plastidial phosphoglucomutase [Brassica napus] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: PGM 1.659e-32
Internal
sp_v3.0_unigene160113 SustainPine v3.0 146
• AutoFact: Uroporphyrinogen decarboxylase n=1 Tax=Ricinus communis RepID=B9SGB6_RICCO 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Uroporphyrinogen decarboxylase 2.562e-13
Putative C-terminus
sp_v3.0_unigene160171 SustainPine v3.0 330
• AutoFact: putative threonyl-tRNA synthetase, putative / threonine--tRNA ligase [Arabidopsis thaliana] gb|AEC05873.1| putative threonyl-tRNA synthetase, putative / threonine--tRNA ligase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene160206 SustainPine v3.0 409
• AutoFact: Thioredoxin reductase n=2 Tax=Picea sitchensis RepID=A9NXV4_PICSI 0.0
• FL-Next: sp=Thioredoxin reductase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thioredoxin reductase 0.0
C-terminus
sp_v3.0_unigene160299 SustainPine v3.0 389
• AutoFact: Histidine biosynthesis protein n=1 Tax=Uncinocarpus reesii 1704 RepID=C4JY90_UNCRE 2.0e-38
• FL-Next: sp=Histidinol dehydrogenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histidinol dehydrogenase 6.344e-25
Internal
sp_v3.0_unigene160592 SustainPine v3.0 412
• AutoFact: RecName: Full=Alpha-amylase isozyme 3D; AltName: Full=1,4-alpha-D-glucan glucanohydrolase; Flags: Precursor dbj|BAD09375.1| alpha-amylase isozyme 3D precursor [Oryza sativa Japonica Group] dbj|BAD09335.1| alpha-amylase isozyme 3D precursor [Oryza sativa J 3.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-amylase 0.0
Internal
sp_v3.0_unigene160626 SustainPine v3.0 512
• AutoFact: Glutamine synthetase n=4 Tax=Hypocreales RepID=GLNA_FUSSH 0.0
• FL-Next: sp=Glutamine synthetase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene160655 SustainPine v3.0 332
• AutoFact: Protein ycf2 n=15 Tax=Strobus RepID=YCF2_PINKO 4.0e-24
• FL-Next: tr=Hypothetical chloroplast protein; Cedrus deodara (Deodar) (Pinus deodara). Plastid; Chloroplast. 0.0
• Sma3: Putative uncharacterized protein ycf2 2.714e-11
Internal
sp_v3.0_unigene160848 SustainPine v3.0 422
• AutoFact: Phospholipase A1-Igamma3, chloroplastic n=2 Tax=Arabidopsis RepID=PLA17_ARATH 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Lipase, putative 1.649e-07
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain