Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast stroma

Term: GO:0009570  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene154551 SustainPine v3.0 446
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Aspergillus clavatus NRRL 1 RepID=A1CJM3_ASPCL 7.00649e-44
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
C-terminus
sp_v3.0_unigene154554 SustainPine v3.0 501
• AutoFact: Probable malate dehydrogenase 1 n=1 Tax=Dictyostelium discoideum RepID=MDHA_DICDI 8.00001e-41
• FL-Next: sp=Malate dehydrogenase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Malate dehydrogenase 1.12104e-44
C-terminus
sp_v3.0_unigene154581 SustainPine v3.0 325
• AutoFact: Ferredoxin-dependent glutamate synthase, fusion of large and small subunits n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7GAZ5_PHATC 5.0e-35
• FL-Next: sp=Glutamate synthase 1 [NADH], chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Glutamate synthase 8.036e-13
Internal
sp_v3.0_unigene154636 SustainPine v3.0 527
• AutoFact: Elongation factor Tu n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LIC7_HALO1 0.0
• FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor Tu 0.0
Internal
sp_v3.0_unigene154699 SustainPine v3.0 267
• AutoFact: Similar to thiazole biosynthetic enzyme n=1 Tax=Leptosphaeria maculans RepID=E5A6L7_LEPMC 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thiazole biosynthetic enzyme 1.787e-17
Internal
sp_v3.0_unigene154717 SustainPine v3.0 370
• AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Cyanidium caldarium RepID=Q9M633_CYACA 9.0e-08
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
C-terminus
sp_v3.0_unigene154772 SustainPine v3.0 353
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=4 Tax=Pinaceae RepID=C9EGT5_9CONI 9.0e-32
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
C-terminus
sp_v3.0_unigene154778 SustainPine v3.0 435
• AutoFact: Superoxide dismutase n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XJ06_HIRBI 0.0
• FL-Next: sp=Superoxide dismutase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Superoxide dismutase 0.0
Internal
sp_v3.0_unigene154820 SustainPine v3.0 137
• AutoFact: Glutathione peroxidase n=1 Tax=Nelumbo nucifera RepID=A3FPF8_NELNU 2.0e-13
• FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione peroxidase 0.0
Internal
sp_v3.0_unigene154903 SustainPine v3.0 310
• AutoFact: Protein tyrosine phosphatase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U1F2_MARAV 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene154954 SustainPine v3.0 330
• AutoFact: Heat shock protein 60 (Fragment) n=1 Tax=Nyctotherus ovalis RepID=Q3LDT0_NYCOV 9.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chaperonin CPN60, mitochondrial 3.006e-11
Internal
sp_v3.0_unigene155001 SustainPine v3.0 308
• AutoFact: Ferredoxin n=2 Tax=Volvox carteri f. nagariensis RepID=A1YQX2_VOLCA 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ferredoxin 0.0
Putative C-terminus
sp_v3.0_unigene155013 SustainPine v3.0 392
• AutoFact: Heat shock protein 9 [Danio rerio] gb|AAI64566.1| Hspa9 protein [Danio rerio] 2.8026e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 0.0
Internal
sp_v3.0_unigene155014 SustainPine v3.0 414
• AutoFact: Glyceraldehyde-3-phosphate dehydrogenase, type I n=7 Tax=Pseudomonas RepID=Q4K7S6_PSEF5 0.0
• FL-Next: tr=Glyceraldehyde-phosphate dehydrogenase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic 6.714e-24
Internal
sp_v3.0_unigene155043 SustainPine v3.0 263
• AutoFact: PREDICTED: thioredoxin-dependent peroxide reductase-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBA27F 5.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thioredoxin peroxidase 5.488e-16
Internal
sp_v3.0_unigene155141 SustainPine v3.0 242
• AutoFact: Cu/Zn superoxide dismutase 1 (Fragment) n=1 Tax=Cucumis sativus RepID=Q3LTL5_CUCSA 5.0e-21
• FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
• Sma3: Superoxide dismutase [Cu-Zn] 0.0
Internal
sp_v3.0_unigene155162 SustainPine v3.0 484
• AutoFact: Nucleoside diphosphate kinase n=2 Tax=Pyrenophora RepID=B2WLH9_PYRTR 0.0
• FL-Next: sp=Nucleoside diphosphate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleoside diphosphate kinase 0.0
N-terminus
sp_v3.0_unigene155369 SustainPine v3.0 249
• AutoFact: Translation elongation factor G n=1 Tax=Streptomyces sp. C RepID=D9VTN4_9ACTO 5.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene155455 SustainPine v3.0 466
• AutoFact: Glutathione peroxidase n=1 Tax=Chlamydomonas sp. W80 RepID=Q9SXL6_CHLSW 0.0
• FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione peroxidase 0.0
C-terminus
sp_v3.0_unigene155486 SustainPine v3.0 452
• AutoFact: Phosphoglycerate kinase n=3 Tax=Eukaryota RepID=C7ZHJ9_NECH7 0.0
• FL-Next: sp=Phosphoglycerate kinase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Phosphoglycerate kinase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain