Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast stroma

Term: GO:0009570  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene151363 SustainPine v3.0 432
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Monosiga brevicollis RepID=A9UYA2_MONBE 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Putative N-terminus
sp_v3.0_unigene151434 SustainPine v3.0 324
• AutoFact: Triosephosphate isomerase n=1 Tax=Oikopleura dioica RepID=E4WXH1_OIKDI 5.99994e-41
• FL-Next: sp=Triosephosphate isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Triosephosphate isomerase 0.0
Internal
sp_v3.0_unigene151471 SustainPine v3.0 518
• AutoFact: Homoserine dehydrogenase n=2 Tax=Sclerotiniaceae RepID=A6S8E9_BOTFB 0.0
• FL-Next: sp=Homoserine dehydrogenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Homoserine dehydrogenase 1.28e-39
C-terminus
sp_v3.0_unigene151522 SustainPine v3.0 337
• AutoFact: PREDICTED: GTP-binding protein CG1354-like isoform 1 [Apis mellifera] 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene151540 SustainPine v3.0 219
• AutoFact: Elongation factor Tu n=4 Tax=Betaproteobacteria RepID=EFTU_AROAE 5.0e-33
• FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: EF-Tu 0.0
Putative C-terminus
sp_v3.0_unigene151566 SustainPine v3.0 466
• AutoFact: 50S ribosomal protein L13 n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PK37_CHIPD 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 50S ribosomal protein L13, chloroplastic 3.183e-19
Internal
sp_v3.0_unigene151569 SustainPine v3.0 296
• AutoFact: Nucleoside diphosphate kinase n=1 Tax=Bacillus halodurans RepID=NDK_BACHD 1.0e-31
• FL-Next: sp=Nucleoside diphosphate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleoside diphosphate kinase 0.0
Internal
sp_v3.0_unigene151624 SustainPine v3.0 382
• AutoFact: 33kDa oxygen evolving protein of photosystem II (Fragment) n=1 Tax=Nephroselmis olivacea RepID=A9CM98_NEPOL 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: OEE1 3.48899e-40
C-terminus
sp_v3.0_unigene151803 SustainPine v3.0 523
• AutoFact: Cytochrome c peroxidase n=1 Tax=Salpingoeca sp. ATCC 50818 RepID=F2U795_9EUKA 0.0
• FL-Next: tr=Ascorbate peroxidase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Ascorbate peroxidase 0.0
C-terminus
sp_v3.0_unigene151831 SustainPine v3.0 356
• AutoFact: ATP-dependent RNA helicase, TRAMP complex subunit Mtr4 [Schizosaccharomyces pombe 972h-] sp|O14232.1|YDVG_SCHPO RecName: Full=Uncharacterized helicase C6F12.16c emb|CAB11099.1| ATP-dependent RNA helicase, TRAMP complex subunit Mtr4 [Schizosaccharomyces po 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Helicase, putative 9.072e-12
N-terminus
sp_v3.0_unigene151871 SustainPine v3.0 254
• AutoFact: Cyclophilin B n=1 Tax=Dictyostelium fasciculatum RepID=F4Q2H7_9MYCE 5.0e-32
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Putative C-terminus
sp_v3.0_unigene151885 SustainPine v3.0 351
• AutoFact: ATP-dependent chaperone ClpB n=1 Tax=Rubrivivax benzoatilyticus JA2 RepID=F3LW36_9BURK 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 101 4.114e-16
N-terminus
sp_v3.0_unigene151888 SustainPine v3.0 341
• AutoFact: inorganic pyrophosphatase [Torpedo marmorata] 3.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Soluble inorganic pyrophosphatase 1, chloroplastic 7.149e-09
Internal
sp_v3.0_unigene151890 SustainPine v3.0 273
• AutoFact: translation elongation factor G n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744E75 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: mEF-G 3.678e-08
Internal
sp_v3.0_unigene151959 SustainPine v3.0 455
• AutoFact: Cysteine synthase n=1 Tax=Phytophthora infestans T30-4 RepID=D0NL10_PHYIT 1.99965e-42
• FL-Next: sp=Cysteine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cysteine synthase 0.0
C-terminus
sp_v3.0_unigene151985 SustainPine v3.0 481
• AutoFact: Superoxide dismutase [Cu-Zn] n=1 Tax=Paramecium tetraurelia RepID=A0DNR4_PARTE 0.0
• FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
• Sma3: Superoxide dismutase [Cu-Zn] 0.0
Putative Complete
sp_v3.0_unigene152081 SustainPine v3.0 233
• AutoFact: Nucleoside diphosphate kinase n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S6Z0_OSTLU 1.0e-20
• FL-Next: sp=Nucleoside diphosphate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleoside diphosphate kinase 0.0
C-terminus
sp_v3.0_unigene152092 SustainPine v3.0 413
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=4 Tax=Sclerotiniaceae RepID=Q6WP53_BOTFU 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
N-terminus
sp_v3.0_unigene152098 SustainPine v3.0 488
• AutoFact: Nucleoside diphosphate kinase n=1 Tax=Cyanothece sp. PCC 7425 RepID=NDK_CYAP4 0.0
• FL-Next: sp=Nucleoside diphosphate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleoside diphosphate kinase 0.0
Putative Complete
sp_v3.0_unigene152118 SustainPine v3.0 449
• AutoFact: Phosphoglycerate kinase n=2 Tax=Trichocomaceae RepID=B6QS27_PENMQ 2.0e-30
• FL-Next: sp=Phosphoglycerate kinase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Phosphoglycerate kinase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain