Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast stroma

Term: GO:0009570  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene6608 SustainPine v3.0 2999
AutoFact: Lipoxygenase n=1 Tax=Ricinus communis RepID=B9RSQ2_RICCO 0.0
FL-Next: sp=Lipoxygenase; Taxus wallichiana var. chinensis (Chinese yew) (Taxus chinensis). 0.0
Sma3: Lipoxygenase 0.0
Complete
sp_v3.0_unigene6665 SustainPine v3.0 1407
AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ricinus communis RepID=B9T6J3_RICCO 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Complete
sp_v3.0_unigene6711 SustainPine v3.0 2115
AutoFact: putative cytochrome P450 [Arabidopsis thaliana] 0.0
FL-Next: sp=Carotene epsilon-monooxygenase, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Lutein deficient 1-like protein 8.479e-08
Complete
sp_v3.0_unigene6848 SustainPine v3.0 782
AutoFact: PREDICTED: similar to LTA2 (PLASTID E2 SUBUNIT OF PYRUVATE DECARBOXYLASE); dihydrolipoyllysine-residue acetyltransferase n=1 Tax=Vitis vinifera RepID=UPI00019828C8 6.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dihydrolipoyllysine-residue acetyltransferase component of pyruvatedehydrogenase complex 2.95e-07
Putative N-terminus
sp_v3.0_unigene6852 SustainPine v3.0 872
AutoFact: Probable alanyl-tRNA synthetase, chloroplastic n=1 Tax=Populus trichocarpa RepID=SYAP_POPTR 0.0
FL-Next: sp=Probable alanine--tRNA ligase, chloroplastic; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene6871 SustainPine v3.0 1700
AutoFact: inositol polyphosphate 1-phosphatase [Arabidopsis thaliana] gb|AED97825.1| inositol polyphosphate 1-phosphatase [Arabidopsis thaliana] 0.0
FL-Next: sp=SAL1 phosphatase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: 3'(2'),5'-bisphosphate nucleotidase 2.821e-18
Complete
sp_v3.0_unigene6912 SustainPine v3.0 2323
AutoFact: ATP sulfurylase 1 [Arabidopsis thaliana] sp|Q9LIK9.1|APS1_ARATH RecName: Full=ATP sulfurylase 1, chloroplastic; Short=AtPS1; Flags: Precursor gb|AAK43869.1|AF370492_1 ATP sulfurylase/APS kinase [Arabidopsis thaliana] dbj|BAB03034.1| ATP sulfurylase/APS ki 0.0
FL-Next: sp=ATP sulfurylase 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP sulfurylase 0.0
Complete
sp_v3.0_unigene6926 SustainPine v3.0 1365
AutoFact: elongation factor Ts family protein [Arabidopsis thaliana] emb|CAB43920.1| putative protein [Arabidopsis thaliana] emb|CAB79664.1| putative protein [Arabidopsis thaliana] gb|AAL10483.1| AT4g29060/F19B15_90 [Arabidopsis thaliana] gb|AEE85580.1| elongation 0.0
FL-Next: sp=Elongation factor Ts, chloroplastic; Rhodomonas salina (Cryptomonas salina). Plastid; Chloroplast. 0.0
Sma3: Elongation factor Ts 1.251e-35
Complete
sp_v3.0_unigene7070 SustainPine v3.0 2254
AutoFact: Glutathione reductase (NADPH) (Fragment) n=3 Tax=Vitis vinifera RepID=O22511_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione reductase 0.0
Complete
sp_v3.0_unigene7083 SustainPine v3.0 1531
AutoFact: Shikimate kinase n=3 Tax=Zea mays RepID=B6UDH4_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Shikimate kinase 1.935e-34
Complete
sp_v3.0_unigene7219 SustainPine v3.0 1416
AutoFact: chloroplast polyprotein of elongation factor Ts precursor [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor Ts 4.088e-07
Putative C-terminus
sp_v3.0_unigene7220 SustainPine v3.0 2530
AutoFact: leucine-rich repeat-like protein [Arabidopsis thaliana] gb|AAG52300.1|AC011020_7 putative receptor protein kinase [Arabidopsis thaliana] gb|AAC18784.1| Similar to ERECTA receptor protein kinase gb|U47029 from A. thaliana [Arabidopsis thaliana] gb|ACN59266 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 2.373e-08
Putative Complete
sp_v3.0_unigene7247 SustainPine v3.0 1985
AutoFact: Alpha-amylase n=2 Tax=Hordeum vulgare subsp. vulgare RepID=C3W8N1_HORVD 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-amylase 0.0
Complete
sp_v3.0_unigene7311 SustainPine v3.0 2163
AutoFact: beta-amylase PCT-BMYI [Solanum tuberosum] 0.0
FL-Next: sp=Beta-amylase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta-amylase 0.0
Complete
sp_v3.0_unigene7368 SustainPine v3.0 2117
AutoFact: Glucose-1-phosphate adenylyltransferase n=3 Tax=Selaginella moellendorffii RepID=D8RB04_SELML 0.0
FL-Next: sp=Glucose-1-phosphate adenylyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glucose-1-phosphate adenylyltransferase 0.0
Complete
sp_v3.0_unigene7384 SustainPine v3.0 3570
AutoFact: Phosphorylase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TJD7_VITVI 0.0
FL-Next: sp=Phosphorylase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phosphorylase 0.0
Complete
sp_v3.0_unigene7420 SustainPine v3.0 1933
AutoFact: RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic; Flags: Precursor gb|AAA34161.1| ATP-dependent protease (CD4B) [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 101 6.982e-16
Complete
sp_v3.0_unigene7455 SustainPine v3.0 1029
AutoFact: Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase, putative n=1 Tax=Ricinus communis RepID=B9ST02_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dihydrolipoamide acetyl transferase 1.613e-07
C-terminus
sp_v3.0_unigene7561 SustainPine v3.0 1924
AutoFact: Lipoxygenase n=1 Tax=Picea sitchensis RepID=C0PT31_PICSI 0.0
FL-Next: sp=Lipoxygenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Lipoxygenase 0.0
C-terminus
sp_v3.0_unigene7654 SustainPine v3.0 1499
AutoFact: Superoxide dismutase n=1 Tax=Ginkgo biloba RepID=B8YNX9_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Superoxide dismutase 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain