Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast stroma

Term: GO:0009570  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene4470 SustainPine v3.0 1000
AutoFact: Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJZ3_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-amylase 0.0
C-terminus
sp_v3.0_unigene4649 SustainPine v3.0 485
AutoFact: dipeptidyl-peptidase, putative 3.0e-09
FL-Next: sp=Probable glutamyl endopeptidase, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene4670 SustainPine v3.0 831
AutoFact: Carotenoid cleavage dioxygenase 4a n=1 Tax=Citrus clementina RepID=A0SE35_9ROSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative 9-cis-epoxycarotenoid dioxygenase 2.733e-22
Putative N-terminus
sp_v3.0_unigene4754 SustainPine v3.0 368
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TPR repeat 2.522e-09
Internal
sp_v3.0_unigene5009 SustainPine v3.0 1100
AutoFact: Glutathione peroxidase (Fragment) n=20 Tax=Picea sitchensis RepID=E5F5S9_PICSI 0.0
FL-Next: sp=Probable phospholipid hydroperoxide glutathione peroxidase; crystallinum). 0.0
Sma3: Glutathione peroxidase 0.0
Complete
sp_v3.0_unigene5073 SustainPine v3.0 391
AutoFact: Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea sitchensis RepID=C0PPY1_PICSI 2.0e-17
FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain 0.0
C-terminus
sp_v3.0_unigene5142 SustainPine v3.0 1232
AutoFact: Chaperone protein htpG family protein [Arabidopsis thaliana] gb|AAL32008.1|AF436826_1 At2g04030/F3C11.14 [Arabidopsis thaliana] gb|AAD32922.1| putative heat shock protein [Arabidopsis thaliana] gb|AAK96633.1| At2g04030/F3C11.14 [Arabidopsis thaliana] gb|A 0.0
FL-Next: tr=GRP94; Pinus taeda (Loblolly pine). 0.0
Sma3: Heat shock protein 90 0.0
Putative N-terminus
sp_v3.0_unigene5311 SustainPine v3.0 2501
AutoFact: 3-ketoacyl-ACP synthase [Cuphea avigera var. pulcherrima] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta-ketoacyl-ACP synthase II 8.124e-17
Complete
sp_v3.0_unigene5343 SustainPine v3.0 3088
AutoFact: starch synthase I [Zea mays] gb|AAB99957.2| plastid starch synthase I precursor [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycosyltransferase family 5 protein 1.475e-26
Putative Complete
sp_v3.0_unigene5366 SustainPine v3.0 1162
AutoFact: Malate dehydrogenase n=1 Tax=Leptosphaeria maculans RepID=E5A6D2_LEPMC 0.0
FL-Next: sp=Malate dehydrogenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Malate dehydrogenase 0.0
Complete
sp_v3.0_unigene5413 SustainPine v3.0 2266
AutoFact: Acetyl-CoA synthetase, putative n=1 Tax=Ricinus communis RepID=B9RGS6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Acetyl CoA synthetase 1.205e-20
Putative C-terminus
sp_v3.0_unigene5428 SustainPine v3.0 2039
AutoFact: RecName: Full=Acetylornithine aminotransferase, mitochondrial; Short=ACOAT; AltName: Full=Acetylornithine transaminase; Short=AOTA; Flags: Precursor emb|CAA69936.1| acetylornithine aminotransferase [Alnus glutinosa] 0.0
FL-Next: sp=Acetylornithine aminotransferase, mitochondrial; Alnus glutinosa (European alder) (Betula alnus var. glutinosa). 0.0
Sma3: Acetylornithine aminotransferase, putative 1.427e-12
Complete
sp_v3.0_unigene5469 SustainPine v3.0 1374
AutoFact: coproporphyrinogen III oxidase [Chlamydomonas reinhardtii] gb|AAD28474.1|AF133671_1 coproporphyrinogen III oxidase precursor [Chlamydomonas reinhardtii] gb|AAD28475.1|AF133672_1 coproporphyrinogen III oxidase precursor [Chlamydomonas reinhardtii] gb|EDP06 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coproporphyrinogen III oxidase 7.419e-34
Complete
sp_v3.0_unigene5476 SustainPine v3.0 2072
AutoFact: phosphoribosylanthranilate transferase [Arabidopsis thaliana] gb|AAO42464.1| phosphorybosyl anthranilate transferase 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Anthranilate phosphoribosyltransferase 3.801e-09
Complete
sp_v3.0_unigene5521 SustainPine v3.0 2737
AutoFact: GTP-binding protein TypA [Trifolium pratense] 0.0
FL-Next: sp=Translation factor GUF1 homolog, chloroplastic; Ostreococcus lucimarinus (strain CCE9901). 0.0
Sma3: GTP-binding protein typa/bipa, putative 1.738e-08
Complete
sp_v3.0_unigene5595 SustainPine v3.0 1384
AutoFact: starch branching enzyme I [Pisum sativum] 5.60519e-45
FL-Next: sp=1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Starch branching enzyme II 6.846e-16
N-terminus
sp_v3.0_unigene5626 SustainPine v3.0 1727
AutoFact: Adenylate kinase family protein n=3 Tax=Arabidopsis RepID=Q8VYL1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Adenylate kinase, putative 7.824e-09
C-terminus
sp_v3.0_unigene5630 SustainPine v3.0 2348
AutoFact: homoserine kinase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Homoserine kinase 9.673e-17
Complete
sp_v3.0_unigene5681 SustainPine v3.0 2144
AutoFact: Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 n=1 Tax=Populus trichocarpa RepID=MTBC_POPTR 0.0
FL-Next: sp=Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1; subsp. trichocarpa). 0.0
Complete
sp_v3.0_unigene5711 SustainPine v3.0 1708
AutoFact: trigger factor type chaperone family protein [Arabidopsis thaliana] gb|AAL75898.1| AT5g55220/MCO15_17 [Arabidopsis thaliana] gb|AAN73293.1| At5g55220/MCO15_17 [Arabidopsis thaliana] gb|AED96601.1| trigger factor type chaperone family protein [Arabidopsis 0.0
FL-Next: sp=Trigger factor-like protein TIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain