Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast stroma

Term: GO:0009570  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene51602 SustainPine v3.0 695
• AutoFact: Peroxiredoxin n=4 Tax=Papilionoideae RepID=B3GV28_PEA 9.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peroxiredoxin 1.511e-15
Putative Complete
sp_v3.0_unigene51681 SustainPine v3.0 501
• AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=A9NMQ0_PICSI 0.0
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
N-terminus
sp_v3.0_unigene51895 SustainPine v3.0 387
• AutoFact: Thioredoxin reductase n=2 Tax=Picea sitchensis RepID=A9NXV4_PICSI 6.0e-40
• FL-Next: sp=Thioredoxin reductase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thioredoxin reductase 0.0
N-terminus
sp_v3.0_unigene52017 SustainPine v3.0 461
• AutoFact: 60S ribosomal protein l19, mitochondrial, putative n=3 Tax=Filobasidiella/Cryptococcus neoformans species complex RepID=E6R107_CRYGW 5.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 50S ribosomal protein L11, chloroplastic 5.017e-11
Putative N-terminus
sp_v3.0_unigene52177 SustainPine v3.0 185
• AutoFact: Putative 2-cys peroxiredoxin (Fragment) n=1 Tax=Lemna minor RepID=C7DRS6_LEMMI 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thioredoxin peroxidase 7.442e-16
Internal
sp_v3.0_unigene52260 SustainPine v3.0 487
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SF38.1|PP222_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09650, chloroplastic; AltName: Full=Protein HIGH CHLOROPHYLL FLUORESCENCE 152; Flags: Precursor gb|AAF 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene52359 SustainPine v3.0 462
• AutoFact: Lipoxygenase n=1 Tax=Olea europaea RepID=B6D1W5_OLEEU 7.00005e-41
• FL-Next: sp=Lipoxygenase; Taxus wallichiana var. chinensis (Chinese yew) (Taxus chinensis). 0.0
• Sma3: Lipoxygenase 0.0
Internal
sp_v3.0_unigene52442 SustainPine v3.0 276
• AutoFact: FtsZ-like protein 2 n=2 Tax=Nicotiana tabacum RepID=Q9SDW6_TOBAC 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: FtsZ1 2.032e-08
Internal
sp_v3.0_unigene52831 SustainPine v3.0 357
• AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Populus trichocarpa RepID=A9PAS6_POPTR 6.0e-21
• FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-dependent Clp protease proteolytic subunit 0.0
Internal
sp_v3.0_unigene52856 SustainPine v3.0 346
• AutoFact: Glutathione S-transferase omega n=1 Tax=Jatropha curcas RepID=D6BR66_9ROSI 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: IN2-1 protein 4.556e-09
Internal
sp_v3.0_unigene52858 SustainPine v3.0 160
• AutoFact: Thioredoxin n=1 Tax=Lilium longiflorum RepID=Q40230_LILLO 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thioredoxin-like 1 8.432e-17
Internal
sp_v3.0_unigene52863 SustainPine v3.0 361
• AutoFact: 46 kDa ketoavyl-ACP synthase n=2 Tax=Ricinus communis RepID=B9RR59_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-ketoacyl-ACP synthase II 3.326e-17
Putative N-terminus
sp_v3.0_unigene52931 SustainPine v3.0 296
• AutoFact: Heat shock protein 101 n=5 Tax=Vitis RepID=Q3L1D0_VITVI 7.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 101 3.902e-16
Internal
sp_v3.0_unigene52995 SustainPine v3.0 383
• AutoFact: Glutathione peroxidase (Fragment) n=20 Tax=Picea sitchensis RepID=E5F5S9_PICSI 7.0e-23
• FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione peroxidase 0.0
Internal
sp_v3.0_unigene53143 SustainPine v3.0 100
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome undetermined scaffold_133, whole genome shotgun sequence 1.034e-07
Putative C-terminus
sp_v3.0_unigene53169 SustainPine v3.0 255
• AutoFact: 3-isopropylmalate dehydratase [Arabidopsis thaliana] sp|Q94AR8.1|LEUC_ARATH RecName: Full=3-isopropylmalate dehydratase; AltName: Full=Isopropylmalate isomerase large subunit 1; Short=AtIIL1; Flags: Precursor gb|AAK76516.1| unknown protein [Arabidopsis th 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene53186 SustainPine v3.0 291
• AutoFact: alanyl-tRNA synthetase [Arabidopsis thaliana] sp|Q9FFC7.2|SYAP_ARATH RecName: Full=Probable alanyl-tRNA synthetase, chloroplastic; AltName: Full=Alanine--tRNA ligase; Short=AlaRS; AltName: Full=Protein EMBRYO DEFECTIVE 1030; AltName: Full=Protein EMBRYO D 2.0e-13
• FL-Next: sp=Probable alanine--tRNA ligase, chloroplastic; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene53371 SustainPine v3.0 345
• AutoFact: galactolipase DONGLE [Arabidopsis thaliana] sp|Q9MA46.1|PLA12_ARATH RecName: Full=Galactolipase DONGLE, chloroplastic; AltName: Full=DAD1-like lipase 6; AltName: Full=Phospholipase A1 DONGLE; AltName: Full=Phospholipase A1-Ialpha1; Flags: Precursor gb|AAF 4.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative DAD1 9.548e-09
Internal
sp_v3.0_unigene53732 SustainPine v3.0 362
• AutoFact: Dihydrolipoyllysine-residue acetyltransferase component of pyruvatedehydrogenase complex n=3 Tax=Andropogoneae RepID=B4G1C9_MAIZE 8.0e-39
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
• Sma3: Dihydrolipoyllysine-residue acetyltransferase component of pyruvatedehydrogenase complex 2.469e-07
Internal
sp_v3.0_unigene53815 SustainPine v3.0 149
• AutoFact: thiamine biosynthesis protein ThiC [Arabidopsis thaliana] ref|NP_850135.1| thiamine biosynthesis protein ThiC [Arabidopsis thaliana] ref|NP_001189634.1| thiamine biosynthesis protein ThiC [Arabidopsis thaliana] gb|AAC35232.1| putative thiamin biosynthesis 7.0e-09
• FL-Next: sp=Phosphomethylpyrimidine synthase, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative thiamin biosynthesis protein 1.082e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain