Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast stroma

Term: GO:0009570  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene49577 SustainPine v3.0 1318
• AutoFact: Glutathione S-transferase n=1 Tax=Pisum sativum RepID=Q76KW1_PEA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione-s-transferase omega, putative 8.24e-16
Complete
sp_v3.0_unigene49630 SustainPine v3.0 943
• AutoFact: Probable fructokinase-4 n=3 Tax=Arabidopsis RepID=SCRK4_ARATH 1.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructokinase, putative 9.288e-17
C-terminus
sp_v3.0_unigene49772 SustainPine v3.0 435
• AutoFact: Carbonic anhydrase n=1 Tax=Picea sitchensis RepID=B8LM78_PICSI 7.0e-26
• FL-Next: sp=Carbonic anhydrase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Carbonic anhydrase 2.363e-17
C-terminus
sp_v3.0_unigene50177 SustainPine v3.0 674
• AutoFact: putative rubisco activase [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Rubisco activase 8.572e-24
Internal
sp_v3.0_unigene50709 SustainPine v3.0 162
• AutoFact: 9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic n=3 Tax=Camelineae RepID=NCED6_ARATH 1.0e-10
• FL-Next: tr=Putative 9-cis-epoxycarotenoid dioxygenase; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: 9-cis-epoxycarotenoid dioxygenase 6.686e-08
Internal
sp_v3.0_unigene50736 SustainPine v3.0 197
• AutoFact: 9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic n=2 Tax=Arabidopsis RepID=NCED2_ARATH 2.0e-21
• FL-Next: tr=Putative 9-cis-epoxycarotenoid dioxygenase; Taxodium distichum (Bald cypress) (Cupressus disticha). 0.0
• Sma3: 9-cis-epoxycarotenoid dioxygenase 6.352e-36
Internal
sp_v3.0_unigene51025 SustainPine v3.0 910
• AutoFact: Os06g0116600 protein n=3 Tax=Oryza sativa RepID=Q5VRK8_ORYSJ 5.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DAG protein 2.061e-20
C-terminus
sp_v3.0_unigene51258 SustainPine v3.0 247
• AutoFact: Glutathione S-transferase-like protein (Fragment) n=9 Tax=Picea sitchensis RepID=E5F6M4_PICSI 3.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione-S-transferase 1.636e-06
N-terminus
sp_v3.0_unigene51349 SustainPine v3.0 546
• AutoFact: pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain 6.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Quinone oxidoreductase-like protein 5.951e-07
N-terminus
sp_v3.0_unigene51411 SustainPine v3.0 605
• AutoFact: Oxygen-evolving enhancer protein 3-1, chloroplastic n=3 Tax=Arabidopsis RepID=PSBQ1_ARATH 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: OEE3 3.453e-25
C-terminus
sp_v3.0_unigene51412 SustainPine v3.0 622
• AutoFact: Oxygen-evolving enhancer protein 3-2 n=1 Tax=Brassica rapa RepID=A8CF48_BRACM 5.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: OEE3 3.453e-25
C-terminus
sp_v3.0_unigene51417 SustainPine v3.0 599
• AutoFact: Fructose-bisphosphate aldolase n=2 Tax=Picea sitchensis RepID=A9NP14_PICSI 2.0e-39
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
C-terminus
sp_v3.0_unigene51418 SustainPine v3.0 608
• AutoFact: PsbP domain-containing protein 4 [Arabidopsis thaliana] sp|O49292.2|PPD4_ARATH RecName: Full=PsbP domain-containing protein 4, chloroplastic; AltName: Full=OEC23-like protein 5; Flags: Precursor gb|AEE35933.1| PsbP domain-containing protein 4 [Arabidopsis 8.0e-31
• FL-Next: sp=PsbP domain-containing protein 4, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene51425 SustainPine v3.0 135
• AutoFact: Photosynthetic oxygen-evolving protein 16 kDa subunit n=2 Tax=Salicornia RepID=B0L6Y3_9CARY 3.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: OEC 16 kDa subunit 4.04e-08
Internal
sp_v3.0_unigene51457 SustainPine v3.0 651
• AutoFact: Malate dehydrogenase n=10 Tax=Pinaceae RepID=A9NVT9_PICSI 5.0e-31
• FL-Next: sp=Malate dehydrogenase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Malate dehydrogenase 6.347e-17
N-terminus
sp_v3.0_unigene51501 SustainPine v3.0 443
• AutoFact: glyceraldehyde-3-phosphate dehydrogenase [Chara vulgaris] 9.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glyceraldehyde-3-phosphate dehydrogenase subunit A 1.393e-29
C-terminus
sp_v3.0_unigene51513 SustainPine v3.0 591
• AutoFact: glyceraldehyde-3-phosphate dehydrogenase [Marchantia polymorpha] 4.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glyceraldehyde-3-phosphate dehydrogenase subunit A 8.013e-14
C-terminus
sp_v3.0_unigene51528 SustainPine v3.0 694
• AutoFact: Glycolate oxidase n=1 Tax=Zantedeschia aethiopica RepID=Q84LB8_ZANAE 1.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycolate oxidase 2.224e-33
C-terminus
sp_v3.0_unigene51562 SustainPine v3.0 496
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene51568 SustainPine v3.0 1094
• AutoFact: Malate dehydrogenase (Fragment) n=2 Tax=Pinus RepID=E3V257_PINSY 1.0e-22
• FL-Next: sp=Malate dehydrogenase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Malate dehydrogenase 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain