Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast stroma

Term: GO:0009570  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene34876 SustainPine v3.0 1748
AutoFact: Catalase n=3 Tax=Picea sitchensis RepID=A9NUY8_PICSI 0.0
FL-Next: sp=Catalase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Catalase 0.0
Complete
sp_v3.0_unigene34925 SustainPine v3.0 1069
AutoFact: putative ornithine carbamoyltransferase [Oryza sativa Japonica Group] gb|EAZ24325.1| hypothetical protein OsJ_08078 [Oryza sativa Japonica Group] dbj|BAH01481.1| unnamed protein product [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ornithine carbamoyltransferase 1.342e-24
C-terminus
sp_v3.0_unigene34944 SustainPine v3.0 1186
AutoFact: Glutathione S-transferase-like protein (Fragment) n=9 Tax=Picea sitchensis RepID=E5F6M4_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione S-transferase 0.0
Complete
sp_v3.0_unigene34960 SustainPine v3.0 809
AutoFact: Glutathione peroxidase n=2 Tax=Picea sitchensis RepID=A9P272_PICSI 0.0
FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione peroxidase 0.0
C-terminus
sp_v3.0_unigene34962 SustainPine v3.0 966
AutoFact: RecName: Full=Tryptophan synthase beta chain 2, chloroplastic; Flags: Precursor gb|AAB97087.1| tryptophan synthase beta subunit [Camptotheca acuminata] gb|AAB97526.1| tryptophan synthase beta [Camptotheca acuminata] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tryptophan synthase beta subunit 2.971e-12
C-terminus
sp_v3.0_unigene34978 SustainPine v3.0 574
AutoFact: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Ginkgo biloba RepID=Q0R5D7_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5.587e-13
Internal
sp_v3.0_unigene34979 SustainPine v3.0 1150
AutoFact: Malate dehydrogenase n=2 Tax=Pinaceae RepID=C9EIK5_9CONI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Malate dehydrogenase 0.0
C-terminus
sp_v3.0_unigene34993 SustainPine v3.0 1124
AutoFact: Sulfite reductase n=2 Tax=Nicotiana RepID=C0JT31_NICBE 0.0
FL-Next: sp=Sulfite reductase 1 [ferredoxin], chloroplastic; Nicotiana tabacum (Common tobacco). 0.0
Sma3: Sulfite reductase 7.492e-21
C-terminus
sp_v3.0_unigene35034 SustainPine v3.0 469
AutoFact: Glutathione S-transferase omega n=1 Tax=Jatropha curcas RepID=D6BR66_9ROSI 8.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione-s-transferase omega, putative 3.528e-12
C-terminus
sp_v3.0_unigene35045 SustainPine v3.0 673
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Plastid-specific 30S ribosomal protein 2 9.67e-09
Putative N-terminus
sp_v3.0_unigene35072 SustainPine v3.0 553
AutoFact: Thioredoxin reductase n=2 Tax=Picea sitchensis RepID=A9NXV4_PICSI 3.0e-30
FL-Next: sp=Thioredoxin reductase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Thioredoxin reductase 0.0
C-terminus
sp_v3.0_unigene35073 SustainPine v3.0 517
AutoFact: Thioredoxin reductase n=2 Tax=Picea sitchensis RepID=A9NXV4_PICSI 0.0
FL-Next: sp=Thioredoxin reductase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Thioredoxin reductase 0.0
Internal
sp_v3.0_unigene35078 SustainPine v3.0 601
AutoFact: 3-oxoacyl-[acyl-carrier-protein] synthase n=1 Tax=Helianthus annuus RepID=A1Z3W6_HELAN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta-ketoacyl-ACP synthase II 9.207e-17
Internal
sp_v3.0_unigene35098 SustainPine v3.0 850
AutoFact: Glycerol-3-phosphate acyltransferase n=1 Tax=Elaeis guineensis RepID=Q9M4V1_ELAGV 0.0
FL-Next: sp=Glycerol-3-phosphate acyltransferase, chloroplastic; Phaseolus vulgaris (Kidney bean) (French bean). 0.0
Sma3: Glycerol-3-phosphate acyltransferase, chloroplastic 2.433e-28
C-terminus
sp_v3.0_unigene35159 SustainPine v3.0 1742
AutoFact: monodehydroascorbate reductase (NADH) [Arabidopsis thaliana] sp|Q9LK94.1|MDAR2_ARATH RecName: Full=Probable monodehydroascorbate reductase, cytoplasmic isoform 2; Short=MDAR 2 dbj|BAB02528.1| cytosolic monodehydroascorbate reductase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Monodehydroascorbate reductase 0.0
C-terminus
sp_v3.0_unigene35179 SustainPine v3.0 495
AutoFact: RecName: Full=Alpha-glucan water dikinase, chloroplastic; AltName: Full=Starch-related protein R1; Flags: Precursor gb|AAM18228.1| R1 [Citrus reticulata] 0.0
FL-Next: sp=Alpha-glucan water dikinase, chloroplastic; Citrus reticulata (Tangerine). 0.0
Sma3: Carbohydrate-binding module family 45 protein 6.257e-17
Internal
sp_v3.0_unigene35333 SustainPine v3.0 385
AutoFact: Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic n=6 Tax=Poaceae RepID=GSA_ORYSJ 5.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic 2.147e-27
Internal
sp_v3.0_unigene35502 SustainPine v3.0 1206
AutoFact: Glutathione peroxidase (Fragment) n=20 Tax=Picea sitchensis RepID=E5F5S9_PICSI 0.0
FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione peroxidase 0.0
Complete
sp_v3.0_unigene35602 SustainPine v3.0 516
AutoFact: Peptide methionine sulfoxide reductase B3, chloroplastic n=2 Tax=Oryza sativa RepID=MSRB3_ORYSJ 9.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Methionine sulfoxide reductase type 4.182e-11
N-terminus
sp_v3.0_unigene35609 SustainPine v3.0 701
AutoFact: Alcohol dehydrogenase, putative n=1 Tax=Ricinus communis RepID=B9SHB0_RICCO 8.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Quinone oxidoreductase-like protein 3.076e-07
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain