Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast stroma

Term: GO:0009570  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene31121 SustainPine v3.0 668
• AutoFact: Thioredoxin F2, chloroplastic n=2 Tax=Arabidopsis RepID=TRXF2_ARATH 9.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene31261 SustainPine v3.0 865
• AutoFact: Nucleoside diphosphate kinase n=1 Tax=Polysphondylium pallidum RepID=D3BL27_POLPA 0.0
• FL-Next: sp=Nucleoside diphosphate kinase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Nucleoside diphosphate kinase 0.0
Complete
sp_v3.0_unigene31269 SustainPine v3.0 560
• AutoFact: 20 kDa cyclophilin precursor [Toxoplasma gondii] 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Complete
sp_v3.0_unigene31298 SustainPine v3.0 684
• AutoFact: Glutathione peroxidase n=1 Tax=Candida glabrata CBS 138 RepID=Q6FWZ5_CANGA 0.0
• FL-Next: sp=Probable phospholipid hydroperoxide glutathione peroxidase; Citrus sinensis (Sweet orange) (Citrus aurantium var. sinensis). 0.0
• Sma3: Glutathione peroxidase 0.0
Complete
sp_v3.0_unigene31305 SustainPine v3.0 469
• AutoFact: Os10g0565200 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q0IVL0_ORYSJ 6.0e-13
• FL-Next: sp=Beta-amylase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene31368 SustainPine v3.0 665
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Blastocystis hominis RepID=D8M4H8_BLAHO 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Complete
sp_v3.0_unigene31402 SustainPine v3.0 645
• AutoFact: Thioredoxin Y, chloroplastic n=1 Tax=Oryza sativa Japonica Group RepID=TRXY_ORYSJ 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thioredoxin y 2.884e-12
Putative Complete
sp_v3.0_unigene31560 SustainPine v3.0 538
• AutoFact: PREDICTED: peptidyl-prolyl cis-trans isomerase H-like n=1 Tax=Pongo abelii RepID=UPI0001D5D432 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pseudotsuga menziesii (Douglas-fir) (Abies menziesii). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Putative Complete
sp_v3.0_unigene31582 SustainPine v3.0 423
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Blastocystis hominis RepID=D8MA36_BLAHO 2.0e-38
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
N-terminus
sp_v3.0_unigene31660 SustainPine v3.0 519
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene31683 SustainPine v3.0 574
• AutoFact: Peptidyl-prolyl cis-trans isomerase slr1251 n=1 Tax=Synechocystis sp. PCC 6803 RepID=PPI2_SYNY3 3.0e-39
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
C-terminus
sp_v3.0_unigene31886 SustainPine v3.0 379
• AutoFact: Cyclophilin A protein-like protein (Fragment) n=1 Tax=Artemia franciscana RepID=C7DZD0_ARTSF 8.0e-25
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
C-terminus
sp_v3.0_unigene31964 SustainPine v3.0 1149
• AutoFact: Glutathione S-transferase n=1 Tax=Pisum sativum RepID=Q76KW1_PEA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione-s-transferase omega, putative 8.822e-16
Complete
sp_v3.0_unigene32041 SustainPine v3.0 394
• AutoFact: Heat shock protein 90 n=1 Tax=Laternula elliptica RepID=B5AAX2_9BIVA 0.0
• FL-Next: tr=GRP94; Pinus taeda (Loblolly pine). 0.0
• Sma3: Heat shock protein 90 0.0
Internal
sp_v3.0_unigene32178 SustainPine v3.0 389
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=4 Tax=Candida RepID=PPIA_CANAL 6.99949e-42
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
N-terminus
sp_v3.0_unigene32263 SustainPine v3.0 479
• AutoFact: Alpha/beta-hydrolase domain-containing protein n=5 Tax=Arabidopsis RepID=F4HYC8_ARATH 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene32314 SustainPine v3.0 791
• AutoFact: Iron-sulfur assembly protein IscA [Arabidopsis thaliana] sp|Q9XIK3.2|ISCAP_ARATH RecName: Full=Iron-sulfur assembly protein IscA, chloroplastic; AltName: Full=Plastid SufA-like protein; AltName: Full=Protein scaffold protein AtCpIscA; Flags: Precursor gb| 8.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Iron-sulfur assembly protein IscA 6.913e-09
Complete
sp_v3.0_unigene32439 SustainPine v3.0 599
• AutoFact: ribosomal protein L27-like [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 50S ribosomal protein L27, chloroplastic 1.96182e-44
Putative Complete
sp_v3.0_unigene32450 SustainPine v3.0 1146
• AutoFact: Thylakoid lumenal 29.8 kDa protein, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SJN0_RICCO 0.0
• FL-Next: sp=PsbP domain-containing protein 6, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene32531 SustainPine v3.0 1007
• AutoFact: NADPH:quinone oxidoreductase [Arabidopsis thaliana] sp|Q9LK88.1|NQR_ARATH RecName: Full=NADPH:quinone oxidoreductase dbj|BAB02535.1| NADPH:quinone oxidoreductase [Arabidopsis thaliana] gb|ABD42979.1| At3g27890 [Arabidopsis thaliana] gb|AEE77376.1| NADPH:q 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NADPH:quinone oxidoreductase, putative 5.207e-13
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain