Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast stroma

Term: GO:0009570  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene28614 SustainPine v3.0 3513
• AutoFact: alpha-amylase-like 3 [Arabidopsis thaliana] gb|AAK91414.1| At1g69830/T17F3_14 [Arabidopsis thaliana] gb|AAN18209.1| At1g69830/T17F3_14 [Arabidopsis thaliana] gb|AEE34983.1| alpha-amylase-like 3 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-amylase 0.0
Complete
sp_v3.0_unigene28745 SustainPine v3.0 2774
• AutoFact: Cytochrome P450, putative n=1 Tax=Ricinus communis RepID=B9RFU0_RICCO 0.0
• FL-Next: sp=Cytochrome P450 704C1; Pinus taeda (Loblolly pine). 0.0
• Sma3: Lutein deficient 1-like protein 1.011e-07
Complete
sp_v3.0_unigene28754 SustainPine v3.0 1038
• AutoFact: Translation elongation factor G, putative n=1 Tax=Ricinus communis RepID=B9RVY0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein synthesis factor, GTP-binding 6.577e-19
Internal
sp_v3.0_unigene28921 SustainPine v3.0 424
• AutoFact: Protein translocase subunit secA n=3 Tax=Oryza sativa Japonica Group RepID=Q0IU29_ORYSJ 0.0
• FL-Next: Isoform 2 of Protein translocase subunit SECA2, chloroplastic OS=Arabidopsis thaliana GN=SECA2 0.0
• Sma3: Protein translocase subunit secA 0.0
Internal
sp_v3.0_unigene29288 SustainPine v3.0 1043
• AutoFact: putative ascorbate peroxidase [Litchi chinensis] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ascorbate peroxidase 0.0
Complete
sp_v3.0_unigene29489 SustainPine v3.0 899
• AutoFact: Glutathione S-transferase n=1 Tax=Pisum sativum RepID=Q76KW1_PEA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione-s-transferase omega, putative 9.124e-16
Complete
sp_v3.0_unigene29591 SustainPine v3.0 995
• AutoFact: Thioredoxin Y, chloroplastic n=1 Tax=Oryza sativa Japonica Group RepID=TRXY_ORYSJ 3.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thioredoxin y 2.884e-12
Complete
sp_v3.0_unigene29786 SustainPine v3.0 799
• AutoFact: 30S ribosomal protein S20, putative n=1 Tax=Ricinus communis RepID=B9T1X1_RICCO 4.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene30061 SustainPine v3.0 1014
• AutoFact: Acyl carrier protein n=3 Tax=Picea sitchensis RepID=A9NK69_PICSI 1.0e-29
• FL-Next: sp=Acyl carrier protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl carrier protein 0.0
Complete
sp_v3.0_unigene30118 SustainPine v3.0 1045
• AutoFact: Ankyrin repeat family protein [Arabidopsis thaliana] gb|AAL61955.1| unknown protein [Arabidopsis thaliana] gb|AAM47892.1| unknown protein [Arabidopsis thaliana] gb|AAM63065.1| unknown [Arabidopsis thaliana] gb|AEE32599.1| Ankyrin repeat family protein [Ar 0.0
• FL-Next: sp=Protein LHCP TRANSLOCATION DEFECT; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene30154 SustainPine v3.0 997
• AutoFact: DnaJ/Hsp40 cysteine-rich domain-containing protein [Arabidopsis thaliana] dbj|BAC42509.1| unknown protein [Arabidopsis thaliana] gb|AAO00738.1| unknown protein [Arabidopsis thaliana] gb|AAP21355.1| At1g75690 [Arabidopsis thaliana] gb|AEE35746.1| DnaJ/Hsp4 2.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene30190 SustainPine v3.0 1025
• AutoFact: Glutathione peroxidase (Fragment) n=20 Tax=Picea sitchensis RepID=E5F5S9_PICSI 0.0
• FL-Next: sp=Probable phospholipid hydroperoxide glutathione peroxidase; Citrus sinensis (Sweet orange) (Citrus aurantium var. sinensis). 0.0
• Sma3: Glutathione peroxidase 0.0
Complete
sp_v3.0_unigene30240 SustainPine v3.0 1081
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr5 scaffold_64, whole genome shotgun sequence 7.481e-06
Complete
sp_v3.0_unigene30314 SustainPine v3.0 943
• AutoFact: Probable glutathione S-transferase n=1 Tax=Picea mariana RepID=O65056_PICMA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione S-transferase GSTU6 3.867e-40
Complete
sp_v3.0_unigene30327 SustainPine v3.0 901
• AutoFact: Acyl carrier protein n=3 Tax=Picea sitchensis RepID=A9NK69_PICSI 0.0
• FL-Next: sp=Acyl carrier protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl carrier protein 0.0
Complete
sp_v3.0_unigene30329 SustainPine v3.0 1144
• AutoFact: Tau class glutathione S-transferase n=2 Tax=Pinus RepID=D3YLT8_9CONI 0.0
• FL-Next: tr=Tau class glutathione S-transferase; Pinus brutia. 0.0
• Sma3: Probable glutathione S-transferase 1.635e-13
Putative Complete
sp_v3.0_unigene30483 SustainPine v3.0 1055
• AutoFact: monothiol glutaredoxin-S14 [Arabidopsis thaliana] sp|Q84Y95.2|GRS14_ARATH RecName: Full=Monothiol glutaredoxin-S14, chloroplastic; Short=AtGRXcp; Short=AtGrxS14; AltName: Full=CAX-interacting protein 1; Short=CXIP1; Flags: Precursor gb|AAK60300.1|AF385708 7.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Uncharacterized monothiol glutaredoxin ycf64 2.349e-08
Complete
sp_v3.0_unigene30787 SustainPine v3.0 618
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Monosiga brevicollis RepID=A9UYA2_MONBE 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Complete
sp_v3.0_unigene30965 SustainPine v3.0 836
• AutoFact: Glutathione peroxidase (Fragment) n=20 Tax=Picea sitchensis RepID=E5F5S9_PICSI 0.0
• FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione peroxidase 0.0
Complete
sp_v3.0_unigene31026 SustainPine v3.0 563
• AutoFact: Nucleoside diphosphate kinase n=1 Tax=Acaryochloris marina MBIC11017 RepID=NDK_ACAM1 0.0
• FL-Next: sp=Nucleoside diphosphate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleoside diphosphate kinase 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain