Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast stroma

Term: GO:0009570  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene25998 SustainPine v3.0 479
• AutoFact: Glutamine synthetase n=4 Tax=Hypocreales RepID=GLNA_FUSSH 0.0
• FL-Next: sp=Glutamine synthetase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene26041 SustainPine v3.0 1707
• AutoFact: Amino acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9S5B3_RICCO 0.0
• FL-Next: sp=Unknown protein DS12 from 2D-PAGE of leaf, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Amino acid binding protein, putative 1.87e-07
Complete
sp_v3.0_unigene26388 SustainPine v3.0 655
• AutoFact: Malate dehydrogenase n=1 Tax=Bursaphelenchus xylophilus RepID=D1MBR2_BURXY 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Malate dehydrogenase 0.0
C-terminus
sp_v3.0_unigene26466 SustainPine v3.0 528
• AutoFact: Peroxiredoxin n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SCE1_HAHCH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thioredoxin peroxidase 4.022e-16
Putative C-terminus
sp_v3.0_unigene26840 SustainPine v3.0 3030
• AutoFact: Protein phosphatase 2C n=1 Tax=Zea mays RepID=B6U2F2_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein phosphatase 2c, putative 1.151e-08
Complete
sp_v3.0_unigene26946 SustainPine v3.0 440
• AutoFact: Glutathione S-transferase-like protein (Fragment) n=9 Tax=Picea sitchensis RepID=E5F6M4_PICSI 2.0e-35
• FL-Next: tr=Glutathione S-transferase-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione S-transferase 9.478e-40
N-terminus
sp_v3.0_unigene27351 SustainPine v3.0 1072
• AutoFact: putative chloroplast-targeted beta-amylase [Oryza sativa Japonica Group] gb|AAP55052.1| Glycosyl hydrolase family 14 protein, expressed [Oryza sativa Japonica Group] 8.0e-13
• FL-Next: sp=Beta-amylase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene27366 SustainPine v3.0 756
• AutoFact: HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase [Arabidopsis thaliana] gb|AED95750.1| HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene27472 SustainPine v3.0 1055
• AutoFact: putative ribosomal S1 protein (with alternative splicing) [Oryza sativa Japonica Group] gb|ABF99860.1| S1 RNA binding domain containing protein, expressed [Oryza sativa Japonica Group] gb|EEC76515.1| hypothetical protein OsI_14295 [Oryza sativa Indica Gro 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene27558 SustainPine v3.0 2767
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene27727 SustainPine v3.0 1843
• AutoFact: 5'-nucleotidase, cytosolic II-like n=2 Tax=Oryza sativa Japonica Group RepID=Q5NBD6_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene27776 SustainPine v3.0 1464
• AutoFact: adenosine kinase [Arabidopsis thaliana] sp|Q9ZUU1.1|KADC1_ARATH RecName: Full=Probable adenylate kinase 1, chloroplastic; Short=AK 1; AltName: Full=ATP-AMP transphosphorylase 1; Flags: Precursor gb|AAC98046.1| putative adenylate kinase [Arabidopsis thalia 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Adenylate kinase 1.778e-12
Complete
sp_v3.0_unigene27780 SustainPine v3.0 623
• AutoFact: Beta-amylase (Fragment) n=5 Tax=Pseudotsuga RepID=C6F9P9_PSEMZ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-amylase 0.0
C-terminus
sp_v3.0_unigene27793 SustainPine v3.0 695
• AutoFact: peroxiredoxin [Hyacinthus orientalis] 4.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peroxiredoxin 1.109e-15
C-terminus
sp_v3.0_unigene28023 SustainPine v3.0 739
• AutoFact: Heavy metal ATPase (Fragment) n=1 Tax=Populus trichocarpa RepID=B9GF99_POPTR 5.0e-23
• FL-Next: Isoform 2 of Copper-transporting ATPase PAA1, chloroplastic OS=Arabidopsis thaliana GN=PAA1 0.0
• Sma3: Heavy metal ATPase 8.757e-07
Putative Complete
sp_v3.0_unigene28090 SustainPine v3.0 722
• AutoFact: Nucleoside diphosphate kinase B putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WEZ2_9STRA 0.0
• FL-Next: sp=Nucleoside diphosphate kinase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Nucleoside diphosphate kinase 0.0
Complete
sp_v3.0_unigene28395 SustainPine v3.0 961
• AutoFact: Lipoxygenase n=1 Tax=Prunus persica RepID=B5TX61_PRUPE 0.0
• FL-Next: sp=Lipoxygenase; Taxus wallichiana var. chinensis (Chinese yew) (Taxus chinensis). 0.0
• Sma3: Lipoxygenase 0.0
C-terminus
sp_v3.0_unigene28424 SustainPine v3.0 2013
• AutoFact: Cysteine synthase n=1 Tax=Picea sitchensis RepID=A9NS10_PICSI 0.0
• FL-Next: sp=Cysteine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cysteine synthase 0.0
Complete
sp_v3.0_unigene28558 SustainPine v3.0 759
• AutoFact: peroxiredoxin [Globodera rostochiensis] 0.0
• FL-Next: tr=Peroxiredoxin-2; Phytophthora infestans (strain T30-4) (Potato late blight fungus). 0.0
• Sma3: Thioredoxin peroxidase 4.076e-16
Complete
sp_v3.0_unigene28567 SustainPine v3.0 554
• AutoFact: Superoxide dismutase [Cu-Zn] n=3 Tax=Crassostrea RepID=E7CHR3_CRAHO 2.0e-37
• FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus pinaster (Maritime pine). 0.0
• Sma3: Superoxide dismutase [Cu-Zn] 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain