Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: chloroplast stroma

Term: GO:0009570  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene24503 SustainPine v3.0 604
AutoFact: PREDICTED: similar to MGC82793 protein isoform 2 [Gallus gallus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Thioredoxin peroxidase 1.708e-19
C-terminus
sp_v3.0_unigene24552 SustainPine v3.0 548
AutoFact: Ferritin n=1 Tax=Branchiostoma belcheri tsingtauense RepID=Q6WNW7_BRABE 0.0
FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ferritin 0.0
Putative C-terminus
sp_v3.0_unigene24632 SustainPine v3.0 844
AutoFact: Probable IPP1-inorganic pyrophosphatase n=2 Tax=Ustilaginaceae RepID=E6ZVN1_9BASI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Inorganic pyrophosphatase 6.17e-10
C-terminus
sp_v3.0_unigene24638 SustainPine v3.0 1991
AutoFact: beta-ketoacyl-ACP synthase I [Jatropha curcas] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta-ketoacyl-ACP synthase II 5.574e-17
Complete
sp_v3.0_unigene24647 SustainPine v3.0 963
AutoFact: ATP-dependent Clp protease ATP-binding subunit ClpA n=49 Tax=Pseudomonadaceae RepID=A6V4G6_PSEA7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 101 4.098e-16
N-terminus
sp_v3.0_unigene24676 SustainPine v3.0 668
AutoFact: Superoxide dismutase n=1 Tax=Ectocarpus siliculosus RepID=D8LI17_ECTSI 0.0
FL-Next: sp=Superoxide dismutase; Pinus pinaster (Maritime pine). 0.0
Sma3: Superoxide dismutase 0.0
C-terminus
sp_v3.0_unigene24694 SustainPine v3.0 381
AutoFact: Cysteine synthase n=3 Tax=Chlamydomonas reinhardtii RepID=A8ISA9_CHLRE 2.0e-40
FL-Next: sp=Cysteine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cysteine synthase 0.0
Internal
sp_v3.0_unigene24786 SustainPine v3.0 1155
AutoFact: Glutathione-S-transferase n=4 Tax=Picea RepID=Q2Q9T2_PICMA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione S-transferase 5.166e-31
Putative Complete
sp_v3.0_unigene24802 SustainPine v3.0 5359
AutoFact: Alpha-glucan water dikinase, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SPI3_RICCO 0.0
FL-Next: sp=Alpha-glucan water dikinase, chloroplastic; Citrus reticulata (Tangerine). 0.0
Sma3: Glucan water dikinase 7.149e-09
Complete
sp_v3.0_unigene24891 SustainPine v3.0 423
AutoFact: Putative glycine-rich RNA-binding protein 2 n=1 Tax=Bambusa oldhamii RepID=B5KLZ7_BAMOL 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycine-rich RNA-binding protein 7.67e-26
N-terminus
sp_v3.0_unigene25047 SustainPine v3.0 1674
AutoFact: SufE-like protein [Arabidopsis thaliana] sp|Q84W65.2|SUFE_ARATH RecName: Full=SufE-like protein, chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE 1374; Flags: Precursor emb|CAA18220.1| putative protein [Arabidopsis thaliana] emb|CAB79505.1| putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: UV-induced protein uvi31, putative 3.168e-09
Complete
sp_v3.0_unigene25070 SustainPine v3.0 936
AutoFact: heat shock like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative heat-shock protein 4.915e-07
C-terminus
sp_v3.0_unigene25425 SustainPine v3.0 442
AutoFact: putative potential copper-transporting ATPase [Oryza sativa Japonica Group] 6.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: p-type ATPase superfamily 2.799e-08
Putative Complete
sp_v3.0_unigene25437 SustainPine v3.0 654
AutoFact: Ankyrin repeat family protein [Arabidopsis thaliana] gb|AAL61955.1| unknown protein [Arabidopsis thaliana] gb|AAM47892.1| unknown protein [Arabidopsis thaliana] gb|AAM63065.1| unknown [Arabidopsis thaliana] gb|AEE32599.1| Ankyrin repeat family protein [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene25453 SustainPine v3.0 3616
AutoFact: putative endomembrane protein 70 [Arabidopsis thaliana] gb|AAK96649.1| T5E21.14/T5E21.14 [Arabidopsis thaliana] gb|AAM16222.1| At1g14670/T5E21.14 [Arabidopsis thaliana] gb|AEE29200.1| putative endomembrane protein 70 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: OEE2 7.252e-40
Complete
sp_v3.0_unigene25481 SustainPine v3.0 1021
AutoFact: 30S ribosomal protein S20, putative n=1 Tax=Ricinus communis RepID=B9T1X1_RICCO 4.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene25542 SustainPine v3.0 539
AutoFact: [D] COG0206 Cell division GTPase 8.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Plastid division protein FtsZ 1.369e-19
Putative N-terminus
sp_v3.0_unigene25565 SustainPine v3.0 2536
AutoFact: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-A, mitochondrial n=4 Tax=Arabidopsis RepID=NDS8A_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NADH-ubiquinone oxidoreductase 23 kDa subunit 1.257e-14
Putative Complete
sp_v3.0_unigene25639 SustainPine v3.0 411
AutoFact: Ferritin n=1 Tax=Aplysia californica RepID=A5GZU9_APLCA 1.0e-36
FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ferritin 0.0
Internal
sp_v3.0_unigene25895 SustainPine v3.0 441
AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Volvox carteri f. nagariensis RepID=D8TV21_VOLCA 0.0
FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent Clp protease proteolytic subunit 6.942e-35
Putative C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain