Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast stroma

Term: GO:0009570  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene22941 SustainPine v3.0 1132
AutoFact: Lipase_GDSL domain containing protein 1.0e-08
FL-Next: sp=GDSL esterase/lipase LIP-4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Alpha-L-fucosidase 2, putative 1.848e-13
Complete
sp_v3.0_unigene22952 SustainPine v3.0 693
AutoFact: 2-cys peroxiredoxin n=2 Tax=Chlamydomonadales RepID=A8I2V3_CHLRE 0.0
FL-Next: tr=2-cys peroxiredoxin; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Sma3: Thioredoxin peroxidase 5.284e-16
Complete
sp_v3.0_unigene23054 SustainPine v3.0 618
AutoFact: Nucleoside diphosphate kinase n=4 Tax=Daphnia pulex RepID=E9FZ29_DAPPU 0.0
FL-Next: sp=Nucleoside diphosphate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleoside diphosphate kinase 0.0
Complete
sp_v3.0_unigene23059 SustainPine v3.0 1068
AutoFact: GST n=1 Tax=Ginkgo biloba RepID=A7E1W9_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione S-transferase 1.865e-33
Complete
sp_v3.0_unigene23082 SustainPine v3.0 1124
AutoFact: thioredoxin-like 4 [Arabidopsis thaliana] sp|Q9C5C5.1|TRL4_ARATH RecName: Full=Thioredoxin-like 4, chloroplastic; AltName: Full=Lilium-type thioredoxin 3; Flags: Precursor gb|AAK28642.1|AF360345_1 unknown protein [Arabidopsis thaliana] gb|AAK93759.1| unkn 4.06377e-44
FL-Next: sp=Thioredoxin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene23157 SustainPine v3.0 422
AutoFact: PREDICTED: similar to phosphoglucomutase 1 n=1 Tax=Ornithorhynchus anatinus RepID=UPI0001555B43 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: PGM 7.025e-33
Putative C-terminus
sp_v3.0_unigene23212 SustainPine v3.0 1773
AutoFact: Alpha-glucan water dikinase, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SPI3_RICCO 0.0
FL-Next: sp=Alpha-glucan water dikinase, chloroplastic; Solanum tuberosum (Potato). 0.0
Sma3: Carbohydrate-binding module family 45 protein 9.673e-17
C-terminus
sp_v3.0_unigene23356 SustainPine v3.0 2352
AutoFact: Catalase n=3 Tax=Picea sitchensis RepID=A9NUY8_PICSI 0.0
FL-Next: sp=Catalase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Catalase 0.0
Complete
sp_v3.0_unigene23416 SustainPine v3.0 634
AutoFact: Alkyl hydroperoxide reductase, thiol specific antioxidant, putative n=2 Tax=Ixodes RepID=B7Q8W6_IXOSC 0.0
FL-Next: tr=2-cys peroxiredoxin; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Sma3: Putative peroxiredoxin ycf42 4.69e-19
Complete
sp_v3.0_unigene23502 SustainPine v3.0 1123
AutoFact: glyceraldehyde-3-phosphate dehydrogenase B subunit [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glyceraldehyde-3-phosphate dehydrogenase 0.0
Putative C-terminus
sp_v3.0_unigene23584 SustainPine v3.0 1178
AutoFact: PREDICTED: similar to Protein translocase subunit secA, chloroplastic n=1 Tax=Vitis vinifera RepID=UPI0001983A2B 0.0
FL-Next: sp=Protein translocase subunit SecA, chloroplastic; Pisum sativum (Garden pea). 0.0
Sma3: Protein translocase subunit secA, chloroplastic 1.286e-16
C-terminus
sp_v3.0_unigene23650 SustainPine v3.0 511
AutoFact: Nucleoside diphosphate kinase n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9BWH2_9EUKA 0.0
FL-Next: sp=Nucleoside diphosphate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleoside diphosphate kinase 0.0
Complete
sp_v3.0_unigene23662 SustainPine v3.0 524
AutoFact: Nucleoside diphosphate kinase n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9BWH2_9EUKA 0.0
FL-Next: sp=Nucleoside diphosphate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleoside diphosphate kinase 0.0
Complete
sp_v3.0_unigene23790 SustainPine v3.0 2865
AutoFact: Lipoxygenase n=1 Tax=Picea sitchensis RepID=B8LLK5_PICSI 0.0
FL-Next: sp=Linoleate 9S-lipoxygenase A; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Sma3: Lipoxygenase 0.0
Complete
sp_v3.0_unigene23914 SustainPine v3.0 2102
AutoFact: DEAD-box ATP-dependent RNA helicase 5 n=2 Tax=Oryza sativa RepID=RH5_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 2.49e-22
Complete
sp_v3.0_unigene23996 SustainPine v3.0 1735
AutoFact: DSPc domain containing protein 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene24015 SustainPine v3.0 725
AutoFact: alpha-glucan water dikinase 1 [Arabidopsis thaliana] sp|Q9SAC6.2|GWD1_ARATH RecName: Full=Alpha-glucan water dikinase 1, chloroplastic; AltName: Full=Protein starch excess 1; AltName: Full=Protein starch-related R1; Flags: Precursor gb|AAG47821.1|AF312027 9.0e-29
FL-Next: sp=Alpha-glucan water dikinase 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene24223 SustainPine v3.0 1686
AutoFact: inositol polyphosphate 1-phosphatase [Arabidopsis thaliana] gb|AED97825.1| inositol polyphosphate 1-phosphatase [Arabidopsis thaliana] 0.0
FL-Next: sp=SAL1 phosphatase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: 3'(2'),5'-bisphosphate nucleotidase 2.821e-18
Complete
sp_v3.0_unigene24237 SustainPine v3.0 3320
AutoFact: 1,4-alpha-glucan branching enzyme (Fragment) n=1 Tax=Solanum tuberosum RepID=O04864_SOLTU 0.0
FL-Next: sp=1,4-alpha-glucan-branching enzyme; Solanum tuberosum (Potato). 0.0
Sma3: Starch branching enzyme I 3.847e-26
Putative Complete
sp_v3.0_unigene24455 SustainPine v3.0 3948
AutoFact: alpha-amylase-like 3 [Arabidopsis thaliana] gb|AAK91414.1| At1g69830/T17F3_14 [Arabidopsis thaliana] gb|AAN18209.1| At1g69830/T17F3_14 [Arabidopsis thaliana] gb|AEE34983.1| alpha-amylase-like 3 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-amylase 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain