Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast stroma

Term: GO:0009570  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene16548 SustainPine v3.0 3587
AutoFact: receptor kinase-like protein [Arabidopsis thaliana] emb|CAB80391.1| receptor kinase-like protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Probable LRR receptor-like serine/threonine-protein kinase At4g37250; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 6.066e-15
Complete
sp_v3.0_unigene16742 SustainPine v3.0 1022
AutoFact: Glucose-1-phosphate adenylyltransferase n=1 Tax=Picea sitchensis RepID=B8LPE1_PICSI 0.0
FL-Next: sp=Glucose-1-phosphate adenylyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glucose-1-phosphate adenylyltransferase 0.0
N-terminus
sp_v3.0_unigene16801 SustainPine v3.0 903
AutoFact: PAP_fibrillin domain containing protein 2.0e-06
FL-Next: Isoform 3 of Probable plastid-lipid-associated protein 13, chloroplastic OS=Arabidopsis thaliana GN=PAP13 0.0
N-terminus
sp_v3.0_unigene16859 SustainPine v3.0 1051
AutoFact: beta-amylase PCT-BMYI [Solanum tuberosum] 0.0
FL-Next: sp=Beta-amylase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta-amylase 0.0
Putative N-terminus
sp_v3.0_unigene16900 SustainPine v3.0 1377
AutoFact: Glucose-1-phosphate adenylyltransferase n=1 Tax=Ricinus communis RepID=B9R7X6_RICCO 0.0
FL-Next: sp=Glucose-1-phosphate adenylyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glucose-1-phosphate adenylyltransferase 0.0
N-terminus
sp_v3.0_unigene16983 SustainPine v3.0 1429
AutoFact: PsbP domain-containing protein 4 [Arabidopsis thaliana] sp|O49292.2|PPD4_ARATH RecName: Full=PsbP domain-containing protein 4, chloroplastic; AltName: Full=OEC23-like protein 5; Flags: Precursor gb|AEE35933.1| PsbP domain-containing protein 4 [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene16993 SustainPine v3.0 994
AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Complete
sp_v3.0_unigene17020 SustainPine v3.0 1089
AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Complete
sp_v3.0_unigene17083 SustainPine v3.0 1029
AutoFact: RecName: Full=NAD(P)H:quinone oxidoreductase; Short=NAD(P)H:QR dbj|BAC23037.1| NAD(P)H:quinone oxidoreductase [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NADPH:quinone oxidoreductase, putative 5.671e-13
Complete
sp_v3.0_unigene17280 SustainPine v3.0 636
AutoFact: Peptide methionine sulfoxide reductase B3, chloroplastic n=2 Tax=Oryza sativa RepID=MSRB3_ORYSJ 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Methionine sulfoxide reductase type 1.46e-10
N-terminus
sp_v3.0_unigene17360 SustainPine v3.0 970
AutoFact: glutathione S-transferase [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione-s-transferase omega, putative 8.24e-16
Complete
sp_v3.0_unigene17410 SustainPine v3.0 1042
AutoFact: Glutathione S-transferase n=1 Tax=Pisum sativum RepID=Q76KW1_PEA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione-s-transferase omega, putative 8.24e-16
Complete
sp_v3.0_unigene17514 SustainPine v3.0 1386
AutoFact: Glutathione S-transferase-like protein n=13 Tax=Picea sitchensis RepID=C0PR46_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione S-transferase 0.0
Complete
sp_v3.0_unigene17592 SustainPine v3.0 1048
AutoFact: RNA binding protein [Nicotiana sylvestris] gb|ADG03640.1| RNA-binding glycine-rich protein [Nicotiana tabacum] 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycine-rich RNA-binding protein 0.0
Complete
sp_v3.0_unigene17656 SustainPine v3.0 1972
AutoFact: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=10 Tax=rosids RepID=METE_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cobalamin-independent methionine synthase 2.015e-23
C-terminus
sp_v3.0_unigene17671 SustainPine v3.0 2241
AutoFact: Epoxide hydrolase n=2 Tax=Nicotiana RepID=Q9ZP87_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutaredoxin 1.094e-28
Complete
sp_v3.0_unigene17688 SustainPine v3.0 1534
AutoFact: Annexin P35 n=1 Tax=Elaeis guineensis RepID=B3TLY9_ELAGV 0.0
FL-Next: sp=Annexin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Annexin 7.708e-30
Complete
sp_v3.0_unigene17692 SustainPine v3.0 1034
AutoFact: Glutathione S-transferase-like protein n=13 Tax=Picea sitchensis RepID=C0PR46_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione S-transferase 0.0
Complete
sp_v3.0_unigene17751 SustainPine v3.0 1163
AutoFact: Superoxide dismutase [Cu-Zn] n=3 Tax=Pinaceae RepID=SODC_PINSY 0.0
FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
Sma3: Superoxide dismutase [Cu-Zn] 0.0
Complete
sp_v3.0_unigene17836 SustainPine v3.0 1594
AutoFact: putative heat-shock protein [Arabidopsis thaliana] gb|AAF21187.1|AC013483_11 putative heat-shock protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative heat-shock protein 4.167e-07
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain