Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast stroma

Term: GO:0009570  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene14426 SustainPine v3.0 483
AutoFact: Ferredoxin-dependent glutamate synthase, chloroplastic n=9 Tax=Poaceae RepID=GLTB_ORYSJ 8.0e-35
FL-Next: sp=Ferredoxin-dependent glutamate synthase, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Ferredoxin-dependent glutamate synthase 9.369e-23
Putative N-terminus
sp_v3.0_unigene14429 SustainPine v3.0 827
AutoFact: Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic n=18 Tax=BEP clade RepID=GLGS_ORYSJ 0.0
FL-Next: sp=Glucose-1-phosphate adenylyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glucose-1-phosphate adenylyltransferase 0.0
C-terminus
sp_v3.0_unigene14431 SustainPine v3.0 702
AutoFact: haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] gb|AAL38840.1| unknown protein [Arabidopsis thaliana] gb|AEE33400.1| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] 4.0e-26
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
C-terminus
sp_v3.0_unigene14460 SustainPine v3.0 1348
AutoFact: [D] COG0206 Cell division GTPase 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Plastid division protein FtsZ 2.504e-27
C-terminus
sp_v3.0_unigene14631 SustainPine v3.0 1277
AutoFact: putative ribose-5-phosphate isomerase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribose-5-phosphate isomerase 2.129e-27
Complete
sp_v3.0_unigene14702 SustainPine v3.0 561
AutoFact: DEAD-box ATP-dependent RNA helicase ISE2 [Arabidopsis thaliana] sp|B9DFG3.2|ISE2_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE 25; AltName: Full=Protein INCREASED SIZE EXCLUSION LIMIT 2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene14766 SustainPine v3.0 576
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SGR5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene14818 SustainPine v3.0 1598
AutoFact: Putative 9-cis-epoxycarotenoid dioxygenase n=9 Tax=Cupressaceae RepID=Q0EEH1_TAXDI 0.0
FL-Next: tr=Putative 9-cis-epoxycarotenoid dioxygenase; Taxodium distichum (Bald cypress) (Cupressus disticha). 0.0
Sma3: 9-cis-epoxycarotenoid dioxygenase 3.005e-40
N-terminus
sp_v3.0_unigene14856 SustainPine v3.0 967
AutoFact: putative peroxiredoxin protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peroxiredoxin 1.662e-15
C-terminus
sp_v3.0_unigene15043 SustainPine v3.0 1301
AutoFact: pfam00675, Peptidase_M16, Insulinase (Peptidase family M16) 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chloroplast processing enzyme 3.449e-09
Putative Complete
sp_v3.0_unigene15046 SustainPine v3.0 1692
AutoFact: Alpha-amylase, putative n=1 Tax=Ricinus communis RepID=B9R8H8_RICCO 0.0
FL-Next: sp=Probable alpha-amylase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Alpha-amylase 0.0
Complete
sp_v3.0_unigene15086 SustainPine v3.0 1231
AutoFact: Copper P1B-ATPase n=2 Tax=Glycine max RepID=A7ISW5_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heavy metal ATPase 2.026e-11
C-terminus
sp_v3.0_unigene15236 SustainPine v3.0 334
AutoFact: Adenylosuccinate synthetase 1 n=1 Tax=Laccaria bicolor S238N-H82 RepID=PURA1_LACBS 0.0
FL-Next: sp=Adenylosuccinate synthetase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Adenylosuccinate synthetase 0.0
Internal
sp_v3.0_unigene15334 SustainPine v3.0 732
AutoFact: phospholipase A1-Igamma1 [Arabidopsis thaliana] sp|Q941F1.2|PLA15_ARATH RecName: Full=Phospholipase A1-Igamma1, chloroplastic; Flags: Precursor gb|AAF63138.1|AC011001_8 Similar to lipases [Arabidopsis thaliana] gb|AAM20450.1| lipase, putative [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Triacylglycerol lipase, putative 5.982e-09
Putative C-terminus
sp_v3.0_unigene15351 SustainPine v3.0 369
AutoFact: Copper-transporting atpase paa1, putative n=1 Tax=Ricinus communis RepID=B9RQX4_RICCO 3.0e-35
FL-Next: sp=Copper-transporting ATPase PAA2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: P-ATPase family transporter: copper ion 1.143e-07
Internal
sp_v3.0_unigene15387 SustainPine v3.0 418
AutoFact: Dihydroxy-acid dehydratase n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8N737_COPC7 0.0
FL-Next: tr=Dihydroxy-acid dehydratase, C-termnial part; Ectocarpus siliculosus (Brown alga). 0.0
Sma3: Dihydroxy-acid dehydratase 2.258e-09
Internal
sp_v3.0_unigene15484 SustainPine v3.0 477
AutoFact: Malate dehydrogenase n=1 Tax=Schizophyllum commune H4-8 RepID=D8QLH9_SCHCM 0.0
FL-Next: sp=Malate dehydrogenase; Sequoia sempervirens (California redwood) (Taxodium sempervirens). 0.0
Sma3: Malate dehydrogenase 0.0
Internal
sp_v3.0_unigene16104 SustainPine v3.0 669
AutoFact: putative isoamylase-type starch debranching enzyme ISO2 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Isoamylase 2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Isoamylase isoform 2 1.521e-12
Internal
sp_v3.0_unigene16129 SustainPine v3.0 1180
AutoFact: Phi class glutathione transferase n=1 Tax=Cathaya argyrophylla RepID=B8YDC4_9CONI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione S-transferase 0.0
Complete
sp_v3.0_unigene16479 SustainPine v3.0 564
AutoFact: Putative 9-cis-epoxycarotenoid dioxygenase n=9 Tax=Cupressaceae RepID=Q0EEH1_TAXDI 1.0e-32
FL-Next: tr=Putative 9-cis-epoxycarotenoid dioxygenase; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: 9-cis-epoxycarotenoid dioxygenase 7.4e-26
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain