Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: 'de novo' IMP biosynthetic process

Term: GO:0006189  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene3499 SustainPine v3.0 2064
AutoFact: Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RI26_PHYPA 0.0
FL-Next: sp=Phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Phosphoribosylaminoimidazole-succinocarboxamide synthase 0.0
Complete
sp_v3.0_unigene3716 SustainPine v3.0 2590
AutoFact: Aminoimidazole ribonucleotide carboxylase n=2 Tax=Physcomitrella patens RepID=A5A0Q9_9BRYO 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Aminoimidazole ribonucleotide carboxylase 1.351e-08
Putative Complete
sp_v3.0_unigene5587 SustainPine v3.0 2166
AutoFact: Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RI26_PHYPA 0.0
FL-Next: sp=Phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Phosphoribosylaminoimidazole-succinocarboxamide synthase 0.0
Complete
sp_v3.0_unigene6353 SustainPine v3.0 1961
AutoFact: Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Picea sitchensis RepID=D5ACW3_PICSI 0.0
FL-Next: sp=Phosphoribosylformylglycinamidine cyclo-ligase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene12707 SustainPine v3.0 1073
AutoFact: Phosphoribosylformylglycinamidine synthase, putative n=2 Tax=Ricinus communis RepID=B9SDY9_RICCO 0.0
FL-Next: sp=Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Phosphoribosylformylglycinamidine synthase, putative 3.06e-09
Putative N-terminus
sp_v3.0_unigene24328 SustainPine v3.0 398
AutoFact: PREDICTED: similar to phosphoribosylformylglycinamidine synthase n=1 Tax=Vitis vinifera RepID=UPI000198487F 1.0e-21
FL-Next: sp=Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Phosphoribosylformylglycinamidine synthase, putative 1.318e-09
Internal
sp_v3.0_unigene29292 SustainPine v3.0 1438
AutoFact: Phosphoribosylglycinamide formyltransferase, chloroplastic n=1 Tax=Vigna unguiculata RepID=PUR3_VIGUN 0.0
FL-Next: sp=Phosphoribosylglycinamide formyltransferase, chloroplastic; Vigna unguiculata (Cowpea). 0.0
Sma3: Phosphoribosylglycinamide formyltransferase, chloroplastic 6.31e-13
Complete
sp_v3.0_unigene30768 SustainPine v3.0 3703
AutoFact: [F] COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phosphoribosylformylglycinamidine synthase 5.587e-13
Complete
sp_v3.0_unigene33451 SustainPine v3.0 1260
AutoFact: Os08g0500900 protein n=2 Tax=Oryza sativa RepID=Q6ZK11_ORYSJ 7.0e-27
FL-Next: sp=Phosphoribosylglycinamide formyltransferase, chloroplastic; Vigna unguiculata (Cowpea). 0.0
Sma3: Glycinamide ribonucleotide transformylase 1.354e-12
C-terminus
sp_v3.0_unigene34640 SustainPine v3.0 1004
AutoFact: glycinamide ribonucleotide transformylase [Solanum tuberosum] 8.0e-25
FL-Next: sp=Phosphoribosylglycinamide formyltransferase, chloroplastic; Vigna unguiculata (Cowpea). 0.0
Sma3: Phosphoribosylglycinamide formyltransferase, chloroplastic 5.199e-13
C-terminus
sp_v3.0_unigene37533 SustainPine v3.0 1019
AutoFact: [F] COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phosphoribosylformylglycinamidine synthase 4.145e-13
N-terminus
sp_v3.0_unigene48109 SustainPine v3.0 581
AutoFact: Phosphoribosylformylglycinamidine synthase, putative n=2 Tax=Ricinus communis RepID=B9SDY9_RICCO 8.0e-32
FL-Next: sp=Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Phosphoribosylformylglycinamidine synthase, putative 1.777e-09
Putative N-terminus
sp_v3.0_unigene48680 SustainPine v3.0 125
AutoFact: RecName: Full=Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial; Short=FGAM synthase; Short=FGAMS; AltName: Full=Formylglycinamide ribotide amidotransferase; Short=FGARAT; AltName: Full=Formylglycinamide ribotide synthetase; 5.0e-08
FL-Next: sp=Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Phosphoribosylformylglycinamidine synthase, putative 2.447e-09
Internal
sp_v3.0_unigene74520 SustainPine v3.0 340
AutoFact: aminoimidazole ribonucleotide carboxylase [Vigna unguiculata] 8.0e-17
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Aminoimidazole ribonucleotide carboxylase 5.817e-09
C-terminus
sp_v3.0_unigene93578 SustainPine v3.0 1385
AutoFact: Phosphoribosylglycinamide formyltransferase, chloroplastic n=1 Tax=Vigna unguiculata RepID=PUR3_VIGUN 0.0
FL-Next: sp=Phosphoribosylglycinamide formyltransferase, chloroplastic; Vigna unguiculata (Cowpea). 0.0
Sma3: Phosphoribosylglycinamide formyltransferase, chloroplastic 6.31e-13
Complete
sp_v3.0_unigene93695 SustainPine v3.0 1053
AutoFact: formyltetrahydrofolate deformylase, putative [Brassica oleracea] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Formyltetrahydrofolate deformylase 8.957e-17
C-terminus
sp_v3.0_unigene94081 SustainPine v3.0 1037
AutoFact: Aminoimidazole ribonucleotide carboxylase n=2 Tax=Physcomitrella patens RepID=A5A0Q9_9BRYO 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Aminoimidazole ribonucleotide carboxylase 1.328e-08
C-terminus
sp_v3.0_unigene100472 SustainPine v3.0 525
AutoFact: phosphoribosylaminoimidazole carboxylase [Nicotiana tabacum] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Aminoimidazole ribonucleotide carboxylase 1.155e-08
Internal
sp_v3.0_unigene104241 SustainPine v3.0 299
AutoFact: Phosphoribosylaminoimidazole carboxylase atpase-subunit, putative n=1 Tax=Ricinus communis RepID=B9S7H9_RICCO 1.0e-37
FL-Next: tr=Phosphoribosylaminoimidazole carboxylase atpase-subunit, putative; Ricinus communis (Castor bean). 0.0
Sma3: Aminoimidazole ribonucleotide carboxylase 9.739e-09
Internal
sp_v3.0_unigene155049 SustainPine v3.0 569
AutoFact: Formyltetrahydrofolate deformylase n=1 Tax=Sclerotinia sclerotiorum 1980 UF-70 RepID=A7ELS5_SCLS1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Formyltetrahydrofolate deformylase 1.478e-21
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain