Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: DNA repair

Term: GO:0006281  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene44141 SustainPine v3.0 976
AutoFact: oligopeptidase B [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Oligopeptidase B, putative 4.862e-12
Internal
sp_v3.0_unigene44382 SustainPine v3.0 1524
AutoFact: putative DNA helicase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA Helicase 4.028e-21
C-terminus
sp_v3.0_unigene44449 SustainPine v3.0 520
AutoFact: putative helicase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CarD-like transcriptional regulator family protein, expressed 8.439e-09
Putative N-terminus
sp_v3.0_unigene45039 SustainPine v3.0 254
AutoFact: DNA excision repair protein E n=2 Tax=Arabidopsis RepID=Q9ZV43_ARATH 1.0e-35
FL-Next: tr=Predicted protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Internal
sp_v3.0_unigene45112 SustainPine v3.0 596
AutoFact: DNA ligase n=1 Tax=Oryza sativa RepID=Q01KE4_ORYSA 0.0
FL-Next: sp=DNA ligase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA ligase 6.707e-10
Internal
sp_v3.0_unigene45170 SustainPine v3.0 169
AutoFact: DNA polymerase kappa subunit n=3 Tax=Arabidopsis thaliana RepID=Q6JDV7_ARATH 4.0e-15
FL-Next: tr=F2J10.13 protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative DNA-directed polymerase, having alternative splicing products 9.277e-10
Internal
sp_v3.0_unigene45522 SustainPine v3.0 402
AutoFact: Putative starch synthase [Oryza sativa Japonica Group] gb|EAZ25012.1| hypothetical protein OsJ_08794 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Starch synthase VI; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Starch synthase V 6.455e-21
Internal
sp_v3.0_unigene45623 SustainPine v3.0 339
AutoFact: DNA glycosylase n=2 Tax=Populus trichocarpa RepID=B9HW11_POPTR 6.99949e-42
FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Sma3: Repressor of silencing 1 1.526e-08
Internal
sp_v3.0_unigene46116 SustainPine v3.0 529
AutoFact: deetiolated 1-like protein [Solanum tuberosum] 8.40779e-45
FL-Next: sp=Light-mediated development protein DET1; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Sma3: Light-mediated development protein DET1 2.893e-14
N-terminus
sp_v3.0_unigene46591 SustainPine v3.0 352
AutoFact: Glucose inhibited division protein A, putative n=1 Tax=Ricinus communis RepID=B9RRF2_RICCO 9.0e-13
FL-Next: tr=Glucose inhibited division protein A, putative; Ricinus communis (Castor bean). 0.0
N-terminus
sp_v3.0_unigene46598 SustainPine v3.0 257
AutoFact: photolyase/blue-light receptor PHR2 [Arabidopsis thaliana] 2.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene47129 SustainPine v3.0 205
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RGZ8_RICCO 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene47906 SustainPine v3.0 870
AutoFact: Cell cycle checkpoint protein RAD17, putative [Oryza sativa Japonica Group] 5.99994e-41
FL-Next: sp=Cell cycle checkpoint protein RAD17; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene48031 SustainPine v3.0 328
AutoFact: Glucose inhibited division protein A, putative n=1 Tax=Ricinus communis RepID=B9RRF2_RICCO 2.8026e-45
FL-Next: tr=Glucose inhibited division protein A, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene48078 SustainPine v3.0 402
AutoFact: Repressor of silencing 3 n=1 Tax=Nicotiana tabacum RepID=A4PF91_TOBAC 1.0e-22
FL-Next: Isoform 1 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Sma3: Repressor of silencing 1 1.408e-08
Internal
sp_v3.0_unigene48117 SustainPine v3.0 386
AutoFact: Transcription-coupled repair protein CSB/RAD26 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SCT4_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene48118 SustainPine v3.0 334
AutoFact: DNA/RNA helicase protein RAD5 [Arabidopsis thaliana] sp|Q9FNI6.1|SM3L2_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Short=SMARCA3-like protein 2 dbj|BAB11681.1| DNA repa 0.0
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA repair helicase rad5,16, putative 5.61e-14
Internal
sp_v3.0_unigene48292 SustainPine v3.0 330
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 2.306e-09
C-terminus
sp_v3.0_unigene48661 SustainPine v3.0 217
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene49946 SustainPine v3.0 278
AutoFact: DNA ligase (Fragment) n=2 Tax=Vitis vinifera RepID=D7SQI2_VITVI 2.0e-13
FL-Next: sp=DNA ligase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain