Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA repair

Term: GO:0006281  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene54611 SustainPine v3.0 345
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative N-terminus
sp_v3.0_unigene54965 SustainPine v3.0 125
AutoFact: Oligopeptidase B, putative n=1 Tax=Ricinus communis RepID=B9RGI7_RICCO 2.0e-13
FL-Next: tr=Oligopeptidase B, putative; Ricinus communis (Castor bean). 0.0
Sma3: Oligopeptidase B, putative 1.327e-08
Internal
sp_v3.0_unigene55247 SustainPine v3.0 401
AutoFact: oligopeptidase B [Triticum aestivum] 6.00036e-42
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Oligopeptidase B, putative 1.616e-08
Internal
sp_v3.0_unigene55357 SustainPine v3.0 277
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600 gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06244.1| pentatricopeptide repe 8.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide, putative, expressed 8.514e-11
Internal
sp_v3.0_unigene55745 SustainPine v3.0 324
AutoFact: endonuclease 2 [Arabidopsis thaliana] gb|AAL32628.1| putative protein [Arabidopsis thaliana] gb|AAM13328.1| putative protein [Arabidopsis thaliana] gb|AEE86606.1| endonuclease 2 [Arabidopsis thaliana] 3.0e-17
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene55918 SustainPine v3.0 383
AutoFact: Nucleosome binding protein n=7 Tax=Ajellomyces RepID=C5G7F6_AJEDR 1.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene56591 SustainPine v3.0 102
AutoFact: Putative DNA repair protein n=1 Tax=Ipomoea trifida RepID=Q6JJ38_IPOTF 5.0e-11
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA repair helicase rad5,16, putative 2.361e-07
Internal
sp_v3.0_unigene56720 SustainPine v3.0 365
AutoFact: putative 6-4 photolyase (UVR3) [Oryza sativa Japonica Group] dbj|BAD38427.1| putative 6-4 photolyase (UVR3) [Oryza sativa Japonica Group] 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 6-4 photolyase 3.801e-09
Internal
sp_v3.0_unigene56803 SustainPine v3.0 426
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 1.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 9.146e-30
Internal
sp_v3.0_unigene56817 SustainPine v3.0 116
AutoFact: Tfiih, polypeptide, putative n=1 Tax=Ricinus communis RepID=B9RZ76_RICCO 1.0e-07
FL-Next: tr=Tfiih, polypeptide, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene56908 SustainPine v3.0 212
AutoFact: Helicase, C-terminal; Haem peroxidase, plant/fungal/bacterial (Fragment) n=1 Tax=Medicago truncatula RepID=Q2HRX1_MEDTR 3.0e-28
FL-Next: tr=Transcription-repair-coupling factor; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: CarD-like transcriptional regulator family protein, expressed 4.688e-09
Internal
sp_v3.0_unigene57566 SustainPine v3.0 260
AutoFact: photoregulatory zinc-finger protein COP1 [Rosa hybrid cultivar] 9.0e-24
FL-Next: sp=E3 ubiquitin-protein ligase COP1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: COP1 6.811e-11
Internal
sp_v3.0_unigene57693 SustainPine v3.0 379
AutoFact: Serine/threonine-protein kinase ATR n=4 Tax=Oryza sativa RepID=ATR_ORYSJ 5.0e-21
FL-Next: sp=Serine/threonine-protein kinase ATR; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Serine/threonine-protein kinase ATR 8.233e-09
Internal
sp_v3.0_unigene57808 SustainPine v3.0 148
AutoFact: Ribonucleoside-diphosphate reductase n=1 Tax=Weeksella virosa DSM 16922 RepID=F0NXD8_WEEVC 6.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene58734 SustainPine v3.0 216
AutoFact: AP endonuclease 2-like n=3 Tax=Oryza sativa RepID=Q69JZ1_ORYSJ 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene58907 SustainPine v3.0 410
AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] 6.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 2.962e-11
Internal
sp_v3.0_unigene58947 SustainPine v3.0 198
AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
Internal
sp_v3.0_unigene59230 SustainPine v3.0 207
AutoFact: DNA ligase n=2 Tax=Selaginella moellendorffii RepID=D8RMH0_SELML 6.0e-12
FL-Next: Isoform 3 of DNA ligase 1 OS=Arabidopsis thaliana GN=LIG1 0.0
Sma3: DNA ligase 5.95e-14
Internal
sp_v3.0_unigene59499 SustainPine v3.0 149
AutoFact: endonuclease V [Dictyostelium discoideum AX4] ref|XP_644681.1| endonuclease V [Dictyostelium discoideum AX4] gb|EAL70644.1| endonuclease V [Dictyostelium discoideum AX4] gb|EAL70800.1| endonuclease V [Dictyostelium discoideum AX4] 1.0e-11
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene59602 SustainPine v3.0 388
AutoFact: photolyase/blue-light receptor PHR2 [Arabidopsis thaliana] 2.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA photolyase protein 6.179e-14
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain