Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Chromosome chr17 scaffold_16, whole genome shotgun sequence

Source: Description from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene5886 SustainPine v3.0 2243
AutoFact: phenylalanyl-tRNA synthetase beta chain [Arabidopsis thaliana] sp|Q9SGE9.1|SYFB_ARATH RecName: Full=Probable phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gb|AAG51865.1|AC010926_28 putative pheny 0.0
FL-Next: sp=Probable phenylalanine--tRNA ligase beta subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome chr17 scaffold_16, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene6206 SustainPine v3.0 2176
AutoFact: Carbon catabolite repressor protein 4 homolog 5 n=2 Tax=Arabidopsis RepID=CCR4E_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr17 scaffold_16, whole genome shotgun sequence 6.946e-06
Complete
sp_v3.0_unigene14719 SustainPine v3.0 325
AutoFact: ATP/DNA binding protein [Arabidopsis thaliana] emb|CAB87905.1| hypothetical protein [Arabidopsis thaliana] gb|AEE78454.1| ATP/DNA binding protein [Arabidopsis thaliana] 1.0e-08
FL-Next: tr=Putative uncharacterized protein Sb05g018376; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Sma3: Chromosome chr17 scaffold_16, whole genome shotgun sequence 4.077e-06
C-terminus
sp_v3.0_unigene27619 SustainPine v3.0 1624
AutoFact: Unassigned protein
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Sma3: Chromosome chr17 scaffold_16, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene34972 SustainPine v3.0 1177
AutoFact: LRR receptor-like serine/threonine-protein kinase FLS2 n=3 Tax=Camelineae RepID=FLS2_ARATH 4.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr17 scaffold_16, whole genome shotgun sequence 1.732e-06
Putative Complete
sp_v3.0_unigene60260 SustainPine v3.0 292
AutoFact: ATP/DNA binding protein [Arabidopsis thaliana] emb|CAB87905.1| hypothetical protein [Arabidopsis thaliana] gb|AEE78454.1| ATP/DNA binding protein [Arabidopsis thaliana] 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Chromosome chr17 scaffold_16, whole genome shotgun sequence 5.406e-07
N-terminus
sp_v3.0_unigene60793 SustainPine v3.0 249
AutoFact: ATP/DNA binding protein [Arabidopsis thaliana] emb|CAB87905.1| hypothetical protein [Arabidopsis thaliana] gb|AEE78454.1| ATP/DNA binding protein [Arabidopsis thaliana] 5.0e-17
FL-Next: tr=Putative uncharacterized protein Sb05g018376; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Sma3: Chromosome chr17 scaffold_16, whole genome shotgun sequence 2.617e-07
Internal
sp_v3.0_unigene68039 SustainPine v3.0 287
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr17 scaffold_16, whole genome shotgun sequence 2.06e-06
Internal
sp_v3.0_unigene68333 SustainPine v3.0 264
AutoFact: receptor protein kinase-like protein [Arabidopsis thaliana] emb|CAB79509.1| receptor protein kinase-like protein [Arabidopsis thaliana] 5.0e-12
FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
Sma3: Chromosome chr17 scaffold_16, whole genome shotgun sequence 5.239e-09
Internal
sp_v3.0_unigene72103 SustainPine v3.0 249
AutoFact: MATE efflux family protein [Arabidopsis thaliana] gb|AAG51691.1|AC016972_10 hypothetical protein; 49518-51504 [Arabidopsis thaliana] gb|AEE35165.1| MATE efflux family protein [Arabidopsis thaliana] 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr17 scaffold_16, whole genome shotgun sequence 6.269e-06
Internal
sp_v3.0_unigene73145 SustainPine v3.0 365
AutoFact: two component regulator [Flavobacterium johnsoniae UW101] gb|ABQ03637.1| Two component regulator three Y domain protein [Flavobacterium johnsoniae UW101] 1.0e-17
FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: Chromosome chr17 scaffold_16, whole genome shotgun sequence 2.232e-07
Internal
sp_v3.0_unigene76739 SustainPine v3.0 320
AutoFact: Cf-2.1 [Solanum pimpinellifolium] gb|AAX19019.1| Cf-2.1 [Solanum pimpinellifolium] prf||2207203A Cf-2 gene 6.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr17 scaffold_16, whole genome shotgun sequence 3.374e-07
Internal
sp_v3.0_unigene80476 SustainPine v3.0 362
AutoFact: Leucine Rich Repeat family protein [Solanum demissum] 9.0e-15
FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
Sma3: Chromosome chr17 scaffold_16, whole genome shotgun sequence 5.991e-07
Internal
sp_v3.0_unigene102941 SustainPine v3.0 572
AutoFact: ATP/DNA binding protein [Arabidopsis thaliana] emb|CAB87905.1| hypothetical protein [Arabidopsis thaliana] gb|AEE78454.1| ATP/DNA binding protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein Sb05g018510; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Sma3: Chromosome chr17 scaffold_16, whole genome shotgun sequence 1.005e-06
Internal
sp_v3.0_unigene107377 SustainPine v3.0 349
AutoFact: ATP/DNA binding protein [Arabidopsis thaliana] emb|CAB87905.1| hypothetical protein [Arabidopsis thaliana] gb|AEE78454.1| ATP/DNA binding protein [Arabidopsis thaliana] 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Chromosome chr17 scaffold_16, whole genome shotgun sequence 7.338e-07
N-terminus
sp_v3.0_unigene128164 SustainPine v3.0 557
AutoFact: [S] COG4886 Leucine-rich repeat (LRR) protein 1.0e-08
FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: Chromosome chr17 scaffold_16, whole genome shotgun sequence 1.644e-06
Internal
sp_v3.0_unigene134223 SustainPine v3.0 313
AutoFact: leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] sp|Q9LVP0.1|Y5639_ARATH RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At5g63930; Flags: Precursor dbj|BAA96896.1| receptor-like protein kinase [Arabidopsis th 1.0e-13
FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: Chromosome chr17 scaffold_16, whole genome shotgun sequence 3.65e-08
Internal
sp_v3.0_unigene164982 SustainPine v3.0 350
AutoFact: ATP/DNA binding protein [Arabidopsis thaliana] emb|CAB87905.1| hypothetical protein [Arabidopsis thaliana] gb|AEE78454.1| ATP/DNA binding protein [Arabidopsis thaliana] 9.00054e-42
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: Chromosome chr17 scaffold_16, whole genome shotgun sequence 8.625e-07
N-terminus
sp_v3.0_unigene166281 SustainPine v3.0 466
AutoFact: Hcr2-5D n=1 Tax=Solanum lycopersicum RepID=Q9ZTJ6_SOLLC 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr17 scaffold_16, whole genome shotgun sequence 3.501e-06
Internal
sp_v3.0_unigene199169 SustainPine v3.0 333
AutoFact: Cytochrome P450 750A1 n=1 Tax=Pinus taeda RepID=C75A1_PINTA 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr17 scaffold_16, whole genome shotgun sequence 6.207e-07
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain