Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Chromosome chr7 scaffold_20, whole genome shotgun sequence

Source: Description from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene4039 SustainPine v3.0 3267
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974832.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAM97093.1| RING finger-like protein [Arabidopsis thaliana] gb|AAT47817.1| At5g24870 [Arabidopsis thaliana] gb|AED9 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr7 scaffold_20, whole genome shotgun sequence 1.669e-06
Complete
sp_v3.0_unigene5705 SustainPine v3.0 1655
AutoFact: putative LepA protein [Oryza sativa Japonica Group] dbj|BAD28168.1| putative LepA protein [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Translation factor GUF1 homolog, chloroplastic; Vitis vinifera (Grape). 0.0
Sma3: Chromosome chr7 scaffold_20, whole genome shotgun sequence 0.0
C-terminus
sp_v3.0_unigene5890 SustainPine v3.0 3536
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9R796_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr7 scaffold_20, whole genome shotgun sequence 4.355e-09
Complete
sp_v3.0_unigene10602 SustainPine v3.0 2477
AutoFact: RING-H2 finger protein RHG1a-like n=1 Tax=Oryza sativa Japonica Group RepID=Q5N7R4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr7 scaffold_20, whole genome shotgun sequence 5.257e-07
Complete
sp_v3.0_unigene10843 SustainPine v3.0 2546
AutoFact: Zeaxanthin epoxidase, chloroplastic (Fragment) n=3 Tax=Vitis vinifera RepID=D7SVX6_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr7 scaffold_20, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene12971 SustainPine v3.0 2409
AutoFact: RING-H2 finger protein RHG1a-like n=1 Tax=Oryza sativa Japonica Group RepID=Q5N7R4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr7 scaffold_20, whole genome shotgun sequence 9.413e-07
Complete
sp_v3.0_unigene16926 SustainPine v3.0 1486
AutoFact: cystathionine beta-synthase domain-containing protein [Arabidopsis thaliana] sp|O23193.2|CBSX1_ARATH RecName: Full=CBS domain-containing protein CBSX1, chloroplastic; AltName: Full=CBS domain-containing protein 2; Short=AtCDCP2; AltName: Full=Protein LOSS 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr7 scaffold_20, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene29408 SustainPine v3.0 2903
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9R796_RICCO 9.80909e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr7 scaffold_20, whole genome shotgun sequence 2.057e-06
Complete
sp_v3.0_unigene37702 SustainPine v3.0 3625
AutoFact: exosome complex exonuclease DIS3/RRP44 [Arabidopsis thaliana] gb|AAL09713.1| At2g17510/MJB20.7 [Arabidopsis thaliana] gb|AAL90959.1| At2g17510/MJB20.7 [Arabidopsis thaliana] gb|AAD32908.2| putative mitotic control protein dis3 [Arabidopsis thaliana] gb|AE 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Chromosome chr7 scaffold_20, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene73540 SustainPine v3.0 457
AutoFact: Receptor serine-threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RXN9_RICCO 9.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr7 scaffold_20, whole genome shotgun sequence 2.655e-07
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain