Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Chromosome chr5 scaffold_72, whole genome shotgun sequence

Source: Description from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene4990 SustainPine v3.0 472
AutoFact: Class IV chitinase Chia4-Pa1.3 n=8 Tax=Picea RepID=Q6WSS1_PICAB 9.80909e-45
FL-Next: tr=Class IV chitinase Chia4-Pa1.3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Chromosome chr5 scaffold_72, whole genome shotgun sequence 3.483e-22
Putative N-terminus
sp_v3.0_unigene5403 SustainPine v3.0 1578
AutoFact: Prp8 binding protein [Arabidopsis thaliana] gb|AAB64029.1| putative splicing factor [Arabidopsis thaliana] gb|AAM13181.1| putative splicing factor [Arabidopsis thaliana] gb|AAP68267.1| At2g43770 [Arabidopsis thaliana] gb|AEC10322.1| Prp8 binding protein [ 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Chromosome chr5 scaffold_72, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene14533 SustainPine v3.0 818
AutoFact: Uridine diphosphate glycosyltransferase 74E2 [Arabidopsis thaliana] sp|Q9SYK9.1|U74E2_ARATH RecName: Full=UDP-glycosyltransferase 74E2 gb|AAD30627.1|AC007153_19 Similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis thaliana] gb|AAY25431.1| At1 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr5 scaffold_72, whole genome shotgun sequence 7.507e-14
C-terminus
sp_v3.0_unigene27889 SustainPine v3.0 431
AutoFact: Class II chitinase 2-1 n=1 Tax=Pseudotsuga menziesii RepID=D7P704_PSEMZ 4.99983e-42
FL-Next: tr=Class VII chitinase; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
Sma3: Chromosome chr5 scaffold_72, whole genome shotgun sequence 3.16e-21
N-terminus
sp_v3.0_unigene42769 SustainPine v3.0 351
AutoFact: Allyl alcohol dehydrogenase n=1 Tax=Nicotiana tabacum RepID=Q9SLN8_TOBAC 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr5 scaffold_72, whole genome shotgun sequence 2.512e-10
N-terminus
sp_v3.0_unigene48053 SustainPine v3.0 1071
AutoFact: Transcription factor IIIC, subunit 5 [Arabidopsis thaliana] gb|AEE78539.1| Transcription factor IIIC, subunit 5 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: Chromosome chr5 scaffold_72, whole genome shotgun sequence 3.379e-06
Putative C-terminus
sp_v3.0_unigene56017 SustainPine v3.0 456
AutoFact: Class IV chitinase n=7 Tax=Pinaceae RepID=C3VP99_PSEMZ 2.0e-27
FL-Next: tr=Class IV chitinase; Pseudotsuga menziesii (Douglas-fir) (Abies menziesii). 0.0
Sma3: Chromosome chr5 scaffold_72, whole genome shotgun sequence 2.664e-14
Putative N-terminus
sp_v3.0_unigene70059 SustainPine v3.0 190
AutoFact: Quinone oxidoreductase-like protein n=3 Tax=Arabidopsis thaliana RepID=Q9LFK4_ARATH 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr5 scaffold_72, whole genome shotgun sequence 1.519e-07
Internal
sp_v3.0_unigene79427 SustainPine v3.0 282
AutoFact: UDP-glycosyltransfersase [Jatropha curcas] 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr5 scaffold_72, whole genome shotgun sequence 4.961e-17
Internal
sp_v3.0_unigene93800 SustainPine v3.0 1126
AutoFact: RAB GTPase activator 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: Chromosome chr5 scaffold_72, whole genome shotgun sequence 5.862e-06
C-terminus
sp_v3.0_unigene127171 SustainPine v3.0 647
AutoFact: Allyl alcohol dehydrogenase n=1 Tax=Nicotiana tabacum RepID=Q9SLN8_TOBAC 4.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr5 scaffold_72, whole genome shotgun sequence 1.179e-14
N-terminus
sp_v3.0_unigene209837 SustainPine v3.0 335
AutoFact: Class II chitinase 2-3 n=1 Tax=Pseudotsuga menziesii RepID=D7P706_PSEMZ 7.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr5 scaffold_72, whole genome shotgun sequence 3.498e-23
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain