Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Chromosome chr6 scaffold_3, whole genome shotgun sequence

Source: Description from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene5399 SustainPine v3.0 2312
AutoFact: putative topoisomerase VI subunit B [Oryza sativa Indica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr6 scaffold_3, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene6855 SustainPine v3.0 1432
AutoFact: branched-chain alpha-keto acid decarboxylase E1 beta subunit [Arabidopsis thaliana] gb|AAD10651.1| branched-chain alpha-keto acid decarboxylase E1 beta subunit [Arabidopsis thaliana] gb|ABD59079.1| At1g55510 [Arabidopsis thaliana] gb|AEE33256.1| branched- 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr6 scaffold_3, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene8944 SustainPine v3.0 2779
AutoFact: putative receptor protein kinase [Arabidopsis thaliana] dbj|BAB09644.1| protein kinase-like protein [Arabidopsis thaliana] gb|AAL91617.1| AT5g59010/k19m22_210 [Arabidopsis thaliana] gb|ABH04487.1| At5g59010 [Arabidopsis thaliana] gb|AED97129.1| putative r 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr6 scaffold_3, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene22562 SustainPine v3.0 1858
AutoFact: Tim17 domain-containing protein [Arabidopsis thaliana] gb|ABN04776.1| At3g10110 [Arabidopsis thaliana] gb|AEE74859.1| Tim17 domain-containing protein [Arabidopsis thaliana] 8.40779e-45
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Chromosome chr6 scaffold_3, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene26300 SustainPine v3.0 660
AutoFact: glucosyltransferase-like protein [Crocus sativus] 5.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr6 scaffold_3, whole genome shotgun sequence 2.266e-06
N-terminus
sp_v3.0_unigene98993 SustainPine v3.0 501
AutoFact: glucosyltransferase-like protein [Crocus sativus] 6.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr6 scaffold_3, whole genome shotgun sequence 3.614e-06
Putative N-terminus
sp_v3.0_unigene139192 SustainPine v3.0 237
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7SL15_VITVI 6.0e-15
FL-Next: sp=Ripening-related protein grip22; Vitis vinifera (Grape). 0.0
Sma3: Chromosome chr6 scaffold_3, whole genome shotgun sequence 1.01e-06
Internal
sp_v3.0_unigene185240 SustainPine v3.0 549
AutoFact: LRR protein WM1.7 [Aegilops tauschii] 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr6 scaffold_3, whole genome shotgun sequence 1.266e-07
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain