Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Chromosome chr4 scaffold_6, whole genome shotgun sequence

Source: Description from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene3198 SustainPine v3.0 1173
AutoFact: putative serine hydrolase [Vitis vinifera] 0.0
FL-Next: tr=PrMC3; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Chromosome chr4 scaffold_6, whole genome shotgun sequence 2.004e-09
Complete
sp_v3.0_unigene5392 SustainPine v3.0 1686
AutoFact: 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] ref|NP_850537.1| 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] gb|AAG40370.1|AF325018_1 AT3g07750 [Arabidopsis thaliana] dbj|BAC43581.1| putative 3' exoribonuclease [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr4 scaffold_6, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene6589 SustainPine v3.0 2652
AutoFact: Threonine synthase, putative n=2 Tax=fabids RepID=B9RK44_RICCO 0.0
FL-Next: sp=Threonine synthase, chloroplastic; Solanum tuberosum (Potato). 0.0
Sma3: Chromosome chr4 scaffold_6, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene16977 SustainPine v3.0 1522
AutoFact: BURP domain-containing protein (Fragment) n=1 Tax=Bruguiera gymnorhiza RepID=Q93XI2_9ROSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr4 scaffold_6, whole genome shotgun sequence 8.834e-18
Complete
sp_v3.0_unigene17922 SustainPine v3.0 1018
AutoFact: Heat shock protein 17.0 n=15 Tax=Picea RepID=Q40851_PICGL 4.0e-27
FL-Next: tr=Heat shock protein 17.0; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Chromosome chr4 scaffold_6, whole genome shotgun sequence 5.94e-12
Complete
sp_v3.0_unigene18193 SustainPine v3.0 477
AutoFact: HSP20 domain containing protein 3.0e-08
Sma3: Chromosome chr4 scaffold_6, whole genome shotgun sequence 2.449e-12
unknown
sp_v3.0_unigene18376 SustainPine v3.0 1335
AutoFact: BURP domain-containing protein (Fragment) n=2 Tax=Bruguiera gymnorhiza RepID=Q94IC5_9ROSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr4 scaffold_6, whole genome shotgun sequence 5.492e-18
Complete
sp_v3.0_unigene20075 SustainPine v3.0 1482
AutoFact: BURP domain-containing protein (Fragment) n=2 Tax=Bruguiera gymnorhiza RepID=Q94IC5_9ROSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr4 scaffold_6, whole genome shotgun sequence 8.834e-18
Complete
sp_v3.0_unigene20239 SustainPine v3.0 1409
AutoFact: BURP domain protein n=3 Tax=Glycine max RepID=B9VSG5_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr4 scaffold_6, whole genome shotgun sequence 1.479e-15
Complete
sp_v3.0_unigene21855 SustainPine v3.0 645
AutoFact: putative serine hydrolase [Vitis vinifera] 8.0e-29
FL-Next: tr=PrMC3; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Chromosome chr4 scaffold_6, whole genome shotgun sequence 4.53e-08
Internal
sp_v3.0_unigene23601 SustainPine v3.0 4280
AutoFact: Precursor of carboxylase p-protein 1, glycine decarboxylase complex n=4 Tax=core eudicotyledons RepID=B9HDN2_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr4 scaffold_6, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene26968 SustainPine v3.0 1477
AutoFact: BURP domain-containing protein n=2 Tax=Glycine max RepID=B2ZPK6_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr4 scaffold_6, whole genome shotgun sequence 1.738e-13
Complete
sp_v3.0_unigene36433 SustainPine v3.0 499
AutoFact: Heat shock protein 17.0 n=15 Tax=Picea RepID=Q40851_PICGL 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr4 scaffold_6, whole genome shotgun sequence 4.975e-13
Putative Complete
sp_v3.0_unigene52870 SustainPine v3.0 509
AutoFact: LRR receptor-like serine/threonine-protein kinase HSL2 n=2 Tax=Arabidopsis RepID=HSL2_ARATH 2.0e-14
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Chromosome chr4 scaffold_6, whole genome shotgun sequence 9.027e-09
Internal
sp_v3.0_unigene70007 SustainPine v3.0 361
AutoFact: pentatricopeptide, putative [Oryza sativa Japonica Group] gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group] 1.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr4 scaffold_6, whole genome shotgun sequence 6.907e-06
C-terminus
sp_v3.0_unigene73464 SustainPine v3.0 381
AutoFact: Receptor-like protein kinase HSL1 n=2 Tax=Arabidopsis RepID=HSL1_ARATH 3.0e-35
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Chromosome chr4 scaffold_6, whole genome shotgun sequence 8.969e-10
Internal
sp_v3.0_unigene95641 SustainPine v3.0 608
AutoFact: Protein kinase family protein with leucine-rich repeat domain [Arabidopsis thaliana] gb|AAD40144.1|AF149413_25 contains similarity to protein kinase domains (Pfam F00069, Score=162.6, E=6.8e-45, N=1) and leucien rich repeats (Pfam PF00560, Score=210.7, E= 2.0e-33
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Chromosome chr4 scaffold_6, whole genome shotgun sequence 1.605e-08
Internal
sp_v3.0_unigene105498 SustainPine v3.0 311
AutoFact: Leucine-rich repeat receptor-like protein kinase n=3 Tax=Arabidopsis RepID=Q9XGZ2_ARATH 2.0e-22
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Chromosome chr4 scaffold_6, whole genome shotgun sequence 5.585e-09
Internal
sp_v3.0_unigene126637 SustainPine v3.0 1411
AutoFact: BURP domain protein n=3 Tax=Glycine max RepID=B9VSG5_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr4 scaffold_6, whole genome shotgun sequence 1.738e-13
Complete
sp_v3.0_unigene126724 SustainPine v3.0 1460
AutoFact: BURP domain protein n=3 Tax=Glycine max RepID=B9VSG5_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr4 scaffold_6, whole genome shotgun sequence 1.479e-15
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain