Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Chromosome chr4 scaffold_6, whole genome shotgun sequence

Source: Description from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene140829 SustainPine v3.0 477
AutoFact: [I] COG0657 Esterase/lipase 2.0e-07
FL-Next: tr=PrMC3; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Chromosome chr4 scaffold_6, whole genome shotgun sequence 2.013e-07
Putative N-terminus
sp_v3.0_unigene142606 SustainPine v3.0 870
AutoFact: putative serine hydrolase [Vitis vinifera] 2.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr4 scaffold_6, whole genome shotgun sequence 5.849e-06
C-terminus
sp_v3.0_unigene144787 SustainPine v3.0 694
AutoFact: Heat shock protein 17.0 n=15 Tax=Picea RepID=Q40851_PICGL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr4 scaffold_6, whole genome shotgun sequence 1.85e-12
N-terminus
sp_v3.0_unigene159925 SustainPine v3.0 481
AutoFact: Protein kinase family protein with leucine-rich repeat domain [Arabidopsis thaliana] gb|AAD40144.1|AF149413_25 contains similarity to protein kinase domains (Pfam F00069, Score=162.6, E=6.8e-45, N=1) and leucien rich repeats (Pfam PF00560, Score=210.7, E= 5.0e-19
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Chromosome chr4 scaffold_6, whole genome shotgun sequence 1.851e-11
Internal
sp_v3.0_unigene185916 SustainPine v3.0 363
AutoFact: putative serine hydrolase [Vitis vinifera] 6.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr4 scaffold_6, whole genome shotgun sequence 2.249e-07
Internal
sp_v3.0_unigene208479 SustainPine v3.0 640
AutoFact: Heat shock protein 17.0 n=15 Tax=Picea RepID=Q40851_PICGL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr4 scaffold_6, whole genome shotgun sequence 4.75e-13
Putative Complete
sp_v3.0_unigene208938 SustainPine v3.0 335
AutoFact: Heat shock protein 17.0 n=15 Tax=Picea RepID=Q40851_PICGL 4.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr4 scaffold_6, whole genome shotgun sequence 3.327e-13
N-terminus
sp_v3.0_unigene209708 SustainPine v3.0 498
AutoFact: Heat shock protein 17.0 n=15 Tax=Picea RepID=Q40851_PICGL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr4 scaffold_6, whole genome shotgun sequence 4.128e-13
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain