Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: single-stranded DNA binding

Term: GO:0003697  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene24891 SustainPine v3.0 423
• AutoFact: Putative glycine-rich RNA-binding protein 2 n=1 Tax=Bambusa oldhamii RepID=B5KLZ7_BAMOL 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycine-rich RNA-binding protein 7.67e-26
N-terminus
sp_v3.0_unigene25442 SustainPine v3.0 841
• AutoFact: Glycine-rich RNA-binding protein n=4 Tax=Pinaceae RepID=Q9XEL4_PICGL 1.99993e-41
• FL-Next: tr=Glycine-rich RNA-binding protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Glycine-rich RNA-binding protein 0.0
Putative Complete
sp_v3.0_unigene26614 SustainPine v3.0 3404
• AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RWJ4_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat protein, putative 1.129e-14
Complete
sp_v3.0_unigene26913 SustainPine v3.0 559
• AutoFact: glycine-rich RNA-binding protein 4 [Arabidopsis thaliana] ref|NP_850629.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana] dbj|BAB03001.1| glycine-rich RNA binding protein-like [Arabidopsis thaliana] gb|AAL50093.1| AT3g23830/F14O13_2 [Arabidopsi 3.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycine-rich RNA-binding protein, putative 7.666e-07
Complete
sp_v3.0_unigene31256 SustainPine v3.0 1382
• AutoFact: single-strand DNA-binding protein [Arabidopsis thaliana] dbj|BAB02216.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76119.1| single-strand DNA-binding protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene32133 SustainPine v3.0 466
• AutoFact: Putative glycine-rich protein n=1 Tax=Picea glauca RepID=Q3HRT2_PICGL 3.99931e-42
• FL-Next: tr=Putative glycine-rich protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Complete
sp_v3.0_unigene32943 SustainPine v3.0 839
• AutoFact: Glycine-rich RNA-binding protein n=1 Tax=Sequoia sempervirens RepID=E5FXB3_SEQSE 9.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycine-rich RNA-binding protein 0.0
Putative Complete
sp_v3.0_unigene34499 SustainPine v3.0 749
• AutoFact: Glycine-rich RNA-binding protein n=4 Tax=Pinaceae RepID=Q9XEL4_PICGL 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycine-rich RNA-binding protein 0.0
Putative Complete
sp_v3.0_unigene36313 SustainPine v3.0 810
• AutoFact: Putative glycine-rich protein n=1 Tax=Picea glauca RepID=Q3HRT2_PICGL 6.0e-19
• FL-Next: tr=Putative glycine-rich protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Putative RSZp22 splicing factor 4.422e-08
Complete
sp_v3.0_unigene37860 SustainPine v3.0 809
• AutoFact: Chalcone synthase (Fragment) n=4 Tax=Pseudotsuga RepID=C6F7B7_PSEMZ 2.0e-18
• FL-Next: tr=Pinocembrin chalcone synthase; Pinus densiflora (Japanese red pine). 0.0
• Sma3: Glycine-rich RNA-binding protein 4.62428e-44
C-terminus
sp_v3.0_unigene46550 SustainPine v3.0 249
• AutoFact: Unassigned protein 1.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene47603 SustainPine v3.0 896
• AutoFact: Single-strand binding protein (ISS) [Ostreococcus tauri] emb|CAL50423.1| Single-strand binding protein (ISS) [Ostreococcus tauri] 1.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene52278 SustainPine v3.0 482
• AutoFact: Unassigned protein 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene53119 SustainPine v3.0 135
• AutoFact: STYLOSA protein n=1 Tax=Antirrhinum majus RepID=Q6H976_ANTMA 2.0e-11
• FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Transcriptional corepressor LEUNIG 7.227e-08
Internal
sp_v3.0_unigene66255 SustainPine v3.0 342
• AutoFact: WD-repeat protein, putative (EC:2.7.11.7) 3.0e-14
• FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Transcriptional corepressor LEUNIG 5.628e-12
N-terminus
sp_v3.0_unigene71783 SustainPine v3.0 139
• AutoFact: Unassigned protein 6.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene71966 SustainPine v3.0 347
• AutoFact: Unassigned protein 1.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene74272 SustainPine v3.0 356
• AutoFact: Putative WD repeat protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7Y1D3_ORYSJ 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Putative N-terminus
sp_v3.0_unigene74691 SustainPine v3.0 359
• AutoFact: putative WD repeat protein [Oryza sativa Japonica Group] 2.0e-20
• FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Transcriptional corepressor LEUNIG 6.153e-12
N-terminus
sp_v3.0_unigene75199 SustainPine v3.0 118
• AutoFact: Unassigned protein
• FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Transcriptional corepressor LEUNIG 4.542e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain