Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytosolic ribosome

Term: GO:0022626  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene157932 SustainPine v3.0 508
• AutoFact: ACYPI001530 protein n=2 Tax=Acyrthosiphon pisum RepID=C4WT85_ACYPI 9.94922e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 7.622e-25
N-terminus
sp_v3.0_unigene157972 SustainPine v3.0 594
• AutoFact: Chaperone protein DnaK n=3 Tax=Rhodocyclaceae RepID=DNAK_AROAE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 0.0
Internal
sp_v3.0_unigene157985 SustainPine v3.0 351
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Trichomonas vaginalis RepID=A2EC21_TRIVA 3.0e-39
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Putative C-terminus
sp_v3.0_unigene158038 SustainPine v3.0 369
• AutoFact: PREDICTED: similar to Proteasome subunit alpha type 6 (Proteasome iota chain) (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) isoform 4 n=2 Tax=Eutheria RepID=UPI00005A16D6 8.0e-35
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 7.28675e-44
N-terminus
sp_v3.0_unigene158060 SustainPine v3.0 441
• AutoFact: Proteasome subunit alpha type n=1 Tax=Branchiostoma floridae RepID=C3Z0Z0_BRAFL 0.0
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 0.0
N-terminus
sp_v3.0_unigene158091 SustainPine v3.0 355
• AutoFact: Heat shock protein 70 n=1 Tax=Aureococcus anophagefferens RepID=F0XYC4_9STRA 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 1.24505e-41
Internal
sp_v3.0_unigene158097 SustainPine v3.0 394
• AutoFact: ribosomal protein S4 [Myxine glutinosa] 3.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 2.043e-20
C-terminus
sp_v3.0_unigene158188 SustainPine v3.0 469
• AutoFact: Ribosomal protein S4 n=3 Tax=Polyphaga RepID=D1M809_9CUCU 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 3.955e-24
N-terminus
sp_v3.0_unigene158200 SustainPine v3.0 381
• AutoFact: Proteasome subunit alpha type n=1 Tax=Ectocarpus siliculosus RepID=D7G614_ECTSI 0.0
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 1.719e-37
N-terminus
sp_v3.0_unigene158211 SustainPine v3.0 351
• AutoFact: PREDICTED: similar to ribosomal protein P0-like protein n=1 Tax=Hydra magnipapillata RepID=UPI00019263C7 5.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene158282 SustainPine v3.0 382
• AutoFact: Molecular chaperones GRP78/BiP/KAR2, HSP70 superfamily n=1 Tax=Ectocarpus siliculosus RepID=D7FQC8_ECTSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 9.48679e-43
Internal
sp_v3.0_unigene158307 SustainPine v3.0 473
• AutoFact: Proteasome subunit alpha type n=1 Tax=Picea sitchensis RepID=A9NP38_PICSI 4.0e-39
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 2.10195e-43
C-terminus
sp_v3.0_unigene158349 SustainPine v3.0 502
• AutoFact: Peptidyl-prolyl cis-trans isomerase B n=1 Tax=Dictyostelium discoideum RepID=PPIB_DICDI 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
N-terminus
sp_v3.0_unigene158411 SustainPine v3.0 518
• AutoFact: 40S ribosomal protein S4 n=4 Tax=Obtectomera RepID=RS4_BOMMO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 3.504e-24
N-terminus
sp_v3.0_unigene158442 SustainPine v3.0 403
• AutoFact: Proteasome subunit alpha type n=1 Tax=Ectocarpus siliculosus RepID=D7G614_ECTSI 0.0
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 2.271e-35
N-terminus
sp_v3.0_unigene158480 SustainPine v3.0 361
• AutoFact: 60S acidic ribosomal protein P0 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NVM9_PHYIT 7.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S acidic ribosomal protein P0 3.156e-19
Internal
sp_v3.0_unigene158608 SustainPine v3.0 401
• AutoFact: Guanine nucleotide-binding protein subunit beta-2-like protein (Fragment) n=1 Tax=Angiostrongylus cantonensis RepID=F5GTH9_9BILA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta-like protein 2.648e-18
N-terminus
sp_v3.0_unigene158610 SustainPine v3.0 309
• AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Culex quinquefasciatus RepID=B0WR64_CULQU 8.0e-22
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
C-terminus
sp_v3.0_unigene158614 SustainPine v3.0 289
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=2 Tax=Andropogoneae RepID=C5X6U8_SORBI 4.0e-24
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
N-terminus
sp_v3.0_unigene158655 SustainPine v3.0 198
• AutoFact: [J] COG1471 Ribosomal protein S4E 4.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 3.336e-24
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain