Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytosolic ribosome

Term: GO:0022626  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene155093 SustainPine v3.0 237
• AutoFact: 40S ribosomal protein S4 n=1 Tax=Dictyostelium discoideum RepID=RS4_DICDI 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 3.336e-24
N-terminus
sp_v3.0_unigene155136 SustainPine v3.0 412
• AutoFact: Proteasome subunit alpha type n=1 Tax=Thalassiosira pseudonana RepID=B8CCQ3_THAPS 1.0e-31
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 3.921e-18
C-terminus
sp_v3.0_unigene155153 SustainPine v3.0 481
• AutoFact: cytosolic heat shock protein 70 [Malawimonas jakobiformis] 5.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 2.40407e-41
C-terminus
sp_v3.0_unigene155212 SustainPine v3.0 348
• AutoFact: Proteasome subunit alpha type n=1 Tax=Arthroderma otae CBS 113480 RepID=C5FD98_ARTOC 8.0e-33
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 7.49e-39
Internal
sp_v3.0_unigene155301 SustainPine v3.0 358
• AutoFact: Ribosomal protein L37 n=2 Tax=Onchocercidae RepID=A8P3W2_BRUMA 6.0e-25
• FL-Next: sp=Ribosomal protein L37; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L37 0.0
Complete
sp_v3.0_unigene155491 SustainPine v3.0 464
• AutoFact: 40S ribosomal protein S4 [Bombyx mori] sp|Q5UAP0.1|RS4_BOMMO RecName: Full=40S ribosomal protein S4 gb|AAV34860.1| ribosomal protein S4 [Bombyx mori] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 3.504e-24
N-terminus
sp_v3.0_unigene155540 SustainPine v3.0 571
• AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Hemerocallis hybrid cultivar RepID=O81658_HEMSP 0.0
• FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyltransferase, putative 1.912e-33
Internal
sp_v3.0_unigene155689 SustainPine v3.0 372
• AutoFact: 40S ribosomal protein S4, X isoform, putative n=2 Tax=Perkinsus marinus ATCC 50983 RepID=C5LEI2_9ALVE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 3.955e-24
N-terminus
sp_v3.0_unigene155712 SustainPine v3.0 400
• AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Babesia bovis RepID=A7AV51_BABBO 4.06377e-44
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
Internal
sp_v3.0_unigene155820 SustainPine v3.0 395
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Cochliobolus lunatus RepID=Q1EHH1_CURLU 2.8026e-45
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
N-terminus
sp_v3.0_unigene155901 SustainPine v3.0 567
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=2 Tax=Micromonas RepID=C1FFK0_MICSR 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Putative Complete
sp_v3.0_unigene155957 SustainPine v3.0 453
• AutoFact: Ribosomal protein L37 n=1 Tax=Adineta ricciae RepID=Q56J85_ADIRI 3.0e-36
• FL-Next: sp=Ribosomal protein L37; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L37 0.0
Complete
sp_v3.0_unigene155975 SustainPine v3.0 281
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=2 Tax=Chlamydomonadales RepID=A8IVQ7_CHLRE 4.0e-36
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pseudotsuga menziesii (Douglas-fir) (Abies menziesii). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Internal
sp_v3.0_unigene156213 SustainPine v3.0 253
• AutoFact: 60 kDa chaperonin n=1 Tax=Magnetospirillum gryphiswaldense RepID=Q6N0B9_9PROT 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chaperonin-60kD, ch60, putative 9.527e-12
Putative C-terminus
sp_v3.0_unigene156369 SustainPine v3.0 296
• AutoFact: Proteasome subunit alpha type n=2 Tax=Chlamydomonadales RepID=A8JEW4_CHLRE 1.0e-27
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 6.335e-13
N-terminus
sp_v3.0_unigene156431 SustainPine v3.0 455
• AutoFact: PREDICTED: similar to proteasome alpha 5 subunit n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000583F3C 0.0
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 1.663e-40
N-terminus
sp_v3.0_unigene156437 SustainPine v3.0 453
• AutoFact: GTP-binding regulatory protein beta chain homolog-Ch (ISS) [Ostreococcus tauri] emb|CAL56484.1| GTP-binding regulatory protein beta chain homolog-Ch (ISS) [Ostreococcus tauri] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta-like protein 2.555e-18
C-terminus
sp_v3.0_unigene156512 SustainPine v3.0 320
• AutoFact: 40S ribosomal protein S4 n=1 Tax=Dictyostelium discoideum RepID=RS4_DICDI 3.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 3.336e-24
N-terminus
sp_v3.0_unigene156539 SustainPine v3.0 524
• AutoFact: Proteasome subunit alpha type n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CGK9_9EUKA 0.0
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 1.775e-25
Putative C-terminus
sp_v3.0_unigene156598 SustainPine v3.0 358
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=2 Tax=Oikopleura dioica RepID=E4YT26_OIKDI 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain