Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytosolic ribosome

Term: GO:0022626  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene147700 SustainPine v3.0 842
• AutoFact: Catalase n=3 Tax=Picea sitchensis RepID=A9NUY8_PICSI 0.0
• FL-Next: sp=Catalase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Catalase 0.0
Misassembled
sp_v3.0_unigene147701 SustainPine v3.0 206
• AutoFact: Catalase n=3 Tax=Picea sitchensis RepID=A9NUY8_PICSI 2.0e-18
• FL-Next: sp=Catalase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Catalase 0.0
Internal
sp_v3.0_unigene147702 SustainPine v3.0 535
• AutoFact: Catalase n=3 Tax=Picea sitchensis RepID=A9NUY8_PICSI 0.0
• FL-Next: sp=Catalase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Catalase 0.0
C-terminus
sp_v3.0_unigene147703 SustainPine v3.0 590
• AutoFact: Catalase n=3 Tax=Picea sitchensis RepID=A9NUY8_PICSI 0.0
• FL-Next: sp=Catalase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Catalase 0.0
Misassembled
sp_v3.0_unigene147739 SustainPine v3.0 1008
• AutoFact: Catalase n=4 Tax=Pinaceae RepID=B1PYP2_PINSY 0.0
• FL-Next: sp=Catalase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Catalase 0.0
Putative C-terminus
sp_v3.0_unigene147965 SustainPine v3.0 533
• AutoFact: Ribosomal protein L37 n=1 Tax=Picea sitchensis RepID=A9NJS5_PICSI 4.0e-21
• FL-Next: sp=Ribosomal protein L37; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L37 0.0
Putative Complete
sp_v3.0_unigene148216 SustainPine v3.0 371
• AutoFact: Aminomethyltransferase, mitochondrial n=2 Tax=Arabidopsis RepID=GCST_ARATH 4.0e-09
• FL-Next: sp=Aminomethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycine cleavage system T protein 5.505e-20
Internal
sp_v3.0_unigene148539 SustainPine v3.0 402
• AutoFact: Isoflavone conjugate-specific beta-glucosidase n=1 Tax=Glycine max RepID=Q08IT7_SOYBN 2.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-glucosidase 0.0
Internal
sp_v3.0_unigene148748 SustainPine v3.0 201
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LIL5.1|PP233_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g15200 dbj|BAB02574.1| unnamed protein product [Arabidopsis thaliana] gb|AEE75631.1| pentatric 9.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene150138 SustainPine v3.0 238
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Paramecium primaurelia RepID=PPIA_PARPR 3.0e-25
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pseudotsuga menziesii (Douglas-fir) (Abies menziesii). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Internal
sp_v3.0_unigene150198 SustainPine v3.0 216
• AutoFact: G protein beta-subunit-like protein (Fragment) n=2 Tax=Nicotiana tabacum RepID=A2V880_TOBAC 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta-like protein 2.555e-18
Internal
sp_v3.0_unigene150227 SustainPine v3.0 471
• AutoFact: Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase, putative n=1 Tax=Toxoplasma gondii RepID=B9PQP0_TOXGO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative 2-oxoglutarate dehydrogenase E2 subunit 1.362e-08
C-terminus
sp_v3.0_unigene150242 SustainPine v3.0 368
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tetrahymena thermophila SB210 RepID=Q22YZ8_TETTH 1.0e-36
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
C-terminus
sp_v3.0_unigene150264 SustainPine v3.0 388
• AutoFact: heat shock protein GroEL n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C36B2 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chaperonin-60kD, ch60, putative 7.491e-11
Internal
sp_v3.0_unigene150343 SustainPine v3.0 355
• AutoFact: chaperonin-60kD, ch60 [Aedes aegypti] gb|EAT36327.1| chaperonin-60kD, ch60 [Aedes aegypti] 4.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: HSP60-2 3.225e-08
Putative C-terminus
sp_v3.0_unigene150356 SustainPine v3.0 445
• AutoFact: Alpha 2 subunit of 20S proteasome (ISS) n=2 Tax=Ostreococcus RepID=Q017X9_OSTTA 0.0
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 2.247e-10
C-terminus
sp_v3.0_unigene150415 SustainPine v3.0 341
• AutoFact: 40S ribosomal protein S4 n=2 Tax=Euteleostei RepID=C0H7L0_SALSA 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 2.131e-20
C-terminus
sp_v3.0_unigene150416 SustainPine v3.0 279
• AutoFact: Acidic ribosomal protein P2 n=1 Tax=Chlamydomonas reinhardtii RepID=A8J0R4_CHLRE 7.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acidic ribosomal protein 1.103e-08
Putative Complete
sp_v3.0_unigene150441 SustainPine v3.0 369
• AutoFact: alpha chain of nascent polypeptide associated complex [Nicotiana benthamiana] 3.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nascent polypeptide-associated complex alpha subunit-like protein 5.203e-12
C-terminus
sp_v3.0_unigene150467 SustainPine v3.0 412
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Meyerozyma guilliermondii ATCC 6260 RepID=A5DBT0_PICGU 9.94922e-44
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain