Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytosolic ribosome

Term: GO:0022626  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene78220 SustainPine v3.0 240
• AutoFact: 40S ribosomal protein S4 n=1 Tax=Postia placenta Mad-698-R RepID=B8P7G3_POSPM 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 1.61e-20
Internal
sp_v3.0_unigene78428 SustainPine v3.0 233
• AutoFact: Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea sitchensis RepID=A9NXP2_PICSI 4.0e-29
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Internal
sp_v3.0_unigene78628 SustainPine v3.0 253
• AutoFact: Alpha chain of nascent polypeptide associated complex n=2 Tax=Solanaceae RepID=A2PYH3_NICBE 8.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nascent polypeptide-associated complex subunit alpha-like protein 9.453e-09
C-terminus
sp_v3.0_unigene79002 SustainPine v3.0 259
• AutoFact: Proteasome subunit alpha type n=3 Tax=Picea sitchensis RepID=A9NK08_PICSI 4.0e-31
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 1.953e-25
Internal
sp_v3.0_unigene79144 SustainPine v3.0 295
• AutoFact: heat shock protein [Coprinopsis cinerea okayama7#130] gb|EAU91259.1| heat shock protein [Coprinopsis cinerea okayama7#130] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 0.0
Internal
sp_v3.0_unigene79320 SustainPine v3.0 416
• AutoFact: 60S acidic ribosomal protein P0 [Lodderomyces elongisporus NRRL YB-4239] gb|EDK47264.1| 60S acidic ribosomal protein P0 [Lodderomyces elongisporus NRRL YB-4239] 3.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S acidic ribosomal protein P0 1.279e-07
C-terminus
sp_v3.0_unigene79362 SustainPine v3.0 323
• AutoFact: Respiratory burst oxidase protein 1 (Fragment) n=1 Tax=Picea abies RepID=E9N9T3_PICAB 9.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Respiratory burst oxidase, putative 5.952e-15
Internal
sp_v3.0_unigene79434 SustainPine v3.0 347
• AutoFact: Proteasome subunit alpha type n=1 Tax=Tuber melanosporum Mel28 RepID=D5GL27_TUBMM 8.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 1.055e-30
C-terminus
sp_v3.0_unigene79566 SustainPine v3.0 249
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Picea sitchensis RepID=A9NLD0_PICSI 2.0e-31
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Internal
sp_v3.0_unigene79714 SustainPine v3.0 312
• AutoFact: 60S acidic ribosomal protein P1 n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9S6M2_VERA1 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S acidic ribosomal protein P1 1.111e-10
N-terminus
sp_v3.0_unigene79750 SustainPine v3.0 349
• AutoFact: 40S ribosomal protein S4 [Meyerozyma guilliermondii ATCC 6260] gb|EDK38739.1| 40S ribosomal protein S4 [Meyerozyma guilliermondii ATCC 6260] 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 1.719e-20
C-terminus
sp_v3.0_unigene80028 SustainPine v3.0 352
• AutoFact: 40S ribosomal protein S4, putative n=1 Tax=Pediculus humanus corporis RepID=E0W344_PEDHC 4.06377e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 4.563e-24
Internal
sp_v3.0_unigene80032 SustainPine v3.0 191
• AutoFact: Alpha-1,4-glucan-protein synthase [UDP-forming], putative n=1 Tax=Ricinus communis RepID=B9SIU1_RICCO 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reversibly glycosylated polypeptide 1.858e-14
Internal
sp_v3.0_unigene80354 SustainPine v3.0 220
• AutoFact: Catalase n=1 Tax=Schizophyllum commune H4-8 RepID=D8PTL6_SCHCM 3.0e-32
• FL-Next: sp=Catalase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Catalase 0.0
Internal
sp_v3.0_unigene80383 SustainPine v3.0 202
• AutoFact: Glutamine synthetase n=2 Tax=Pinaceae RepID=Q9ZS52_PINSY 9.0e-15
• FL-Next: sp=Glutamine synthetase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutamine synthetase 0.0
Misassembled
sp_v3.0_unigene80822 SustainPine v3.0 195
• AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=B8LMQ9_PICSI 2.0e-07
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
C-terminus
sp_v3.0_unigene81155 SustainPine v3.0 134
• AutoFact: Respiratory burst oxidase, putative n=1 Tax=Ricinus communis RepID=B9RG33_RICCO 2.0e-13
• FL-Next: sp=Respiratory burst oxidase homolog protein D; Solanum tuberosum (Potato). 0.0
• Sma3: NADPH oxidase 1.076e-11
Internal
sp_v3.0_unigene81375 SustainPine v3.0 128
• AutoFact: 40s ribosomal protein s4, putative [Toxoplasma gondii RH] 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 3.858e-17
Internal
sp_v3.0_unigene81548 SustainPine v3.0 159
• AutoFact: Ribosomal protein L37 n=4 Tax=Tremellaceae RepID=E6R2B3_CRYGW 1.0e-11
• FL-Next: sp=Ribosomal protein L37; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L37 0.0
Internal
sp_v3.0_unigene93823 SustainPine v3.0 1248
• AutoFact: Beta-glucosidase n=1 Tax=Pinus contorta RepID=Q9ZT64_PINCO 0.0
• FL-Next: tr=Beta-glucosidase; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
• Sma3: Beta-glucosidase, putative 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain