Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytosolic ribosome

Term: GO:0022626  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene74571 SustainPine v3.0 170
• AutoFact: Beta-glucosidase 6 n=3 Tax=Oryza sativa RepID=BGL06_ORYSJ 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-glucosidase 1.367e-24
C-terminus
sp_v3.0_unigene74656 SustainPine v3.0 240
• AutoFact: RecName: Full=40S ribosomal protein S5 emb|CAA06491.1| 40S ribosomal protein S5 [Cicer arietinum] 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 3.497e-21
Internal
sp_v3.0_unigene74701 SustainPine v3.0 394
• AutoFact: Ribosomal protein L37 n=1 Tax=Moniliophthora perniciosa FA553 RepID=E2LSH3_MONPE 7.0e-31
• FL-Next: sp=Ribosomal protein L37; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L37 0.0
Putative Complete
sp_v3.0_unigene74736 SustainPine v3.0 239
• AutoFact: RecName: Full=40S ribosomal protein S5 emb|CAA06491.1| 40S ribosomal protein S5 [Cicer arietinum] 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 3.497e-21
Internal
sp_v3.0_unigene74951 SustainPine v3.0 272
• AutoFact: NADPH oxidase (Fragment) n=2 Tax=Pyrus pyrifolia RepID=Q7X9C6_PYRPY 4.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Respiratory burst oxidase, putative 8.78e-15
N-terminus
sp_v3.0_unigene75103 SustainPine v3.0 426
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=2 Tax=Sclerotiniaceae RepID=A7F0U7_SCLS1 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Putative C-terminus
sp_v3.0_unigene76189 SustainPine v3.0 265
• AutoFact: RecName: Full=Respiratory burst oxidase homolog protein A; AltName: Full=NADPH oxidase RBOHA; AltName: Full=StRBOHA dbj|BAB70750.1| respiratory burst oxidase homolog [Solanum tuberosum] 3.0e-26
• FL-Next: sp=Respiratory burst oxidase homolog protein A; Solanum tuberosum (Potato). 0.0
• Sma3: Respiratory burst oxidase, putative 7.257e-16
Internal
sp_v3.0_unigene76229 SustainPine v3.0 331
• AutoFact: Receptor of activated protein kinase C 1A, component of 40S small ribosomal subunit [Ostreococcus lucimarinus CCE9901] ref|XP_001422858.1| Receptor of activated protein kinase C 1B, component of 40S small ribosomal subunit [Ostreococcus lucimarinus CCE990 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta-like protein 2.793e-18
Misassembled
sp_v3.0_unigene76331 SustainPine v3.0 366
• AutoFact: Beta-glucosidase 24 n=2 Tax=Oryza sativa RepID=BGL24_ORYSJ 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-glucosidase, putative 1.376e-34
Internal
sp_v3.0_unigene76513 SustainPine v3.0 279
• AutoFact: Singapore isolate B (sub-type 7) whole genome shotgun sequence assembly, scaffold_15 n=1 Tax=Blastocystis hominis RepID=D8M187_BLAHO 4.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 2.131e-20
Putative C-terminus
sp_v3.0_unigene76543 SustainPine v3.0 301
• AutoFact: Ribosomal family S4e containing protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CBCC9 4.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 2.819e-14
Internal
sp_v3.0_unigene76976 SustainPine v3.0 193
• AutoFact: Heat shock protein 70 kDa (Fragment) n=2 Tax=Pseudotsuga RepID=C6FCI5_PSEMZ 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 2.805e-16
Internal
sp_v3.0_unigene77049 SustainPine v3.0 309
• AutoFact: Beta-primeverosidase n=3 Tax=Camellia sinensis RepID=Q7X9A9_CAMSI 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-glucosidase, putative 3.067e-25
Internal
sp_v3.0_unigene77095 SustainPine v3.0 127
• AutoFact: Fructose-bisphosphate aldolase, class I (IC) n=1 Tax=Ostreococcus tauri RepID=Q01GD0_OSTTA 1.0e-11
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
Internal
sp_v3.0_unigene77208 SustainPine v3.0 228
• AutoFact: Catalase n=3 Tax=Picea sitchensis RepID=A9NUY8_PICSI 2.0e-11
• FL-Next: sp=Catalase-3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Catalase 1.252e-18
Internal
sp_v3.0_unigene77282 SustainPine v3.0 256
• AutoFact: ribosomal protein S4 [Panax ginseng] 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 2.834e-17
C-terminus
sp_v3.0_unigene77295 SustainPine v3.0 441
• AutoFact: likely cytosolic ribosomal acidic protein P0 [Candida albicans SC5314] ref|XP_888730.1| hypothetical protein CaO19_7015 [Candida albicans SC5314] gb|EAL01462.1| likely cytosolic ribosomal acidic protein P0 [Candida albicans SC5314] dbj|BAE44627.1| hypothe 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S acidic ribosomal protein P0 3.156e-19
Internal
sp_v3.0_unigene77453 SustainPine v3.0 495
• AutoFact: Putative beta-glucosidase [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-glucosidase, putative 0.0
C-terminus
sp_v3.0_unigene78086 SustainPine v3.0 327
• AutoFact: Glutamine synthetase n=1 Tax=Amanita muscaria RepID=GLNA_AMAMU 9.80909e-45
• FL-Next: sp=Glutamine synthetase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutamine synthetase 0.0
Putative C-terminus
sp_v3.0_unigene78100 SustainPine v3.0 350
• AutoFact: Beta-glucosidase G4 n=1 Tax=Medicago truncatula RepID=A8TVR1_MEDTR 4.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-glucosidase 2.8026e-45
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain