Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytosolic ribosome

Term: GO:0022626  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene68715 SustainPine v3.0 200
• AutoFact: Nascent polypeptide-associated complex subunit alpha-like protein n=2 Tax=Pinaceae RepID=NACA_PINTA 3.0e-17
• FL-Next: sp=Nascent polypeptide-associated complex subunit alpha-like protein; Pinus taeda (Loblolly pine). 0.0
• Sma3: Nascent polypeptide associated complex alpha subunit, putative 1.118e-12
C-terminus
sp_v3.0_unigene69041 SustainPine v3.0 314
• AutoFact: Respiratory burst oxidase homolog protein F n=5 Tax=core eudicotyledons RepID=RBOHF_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Respiratory burst oxidase, putative 2.448e-18
Internal
sp_v3.0_unigene70660 SustainPine v3.0 492
• AutoFact: Serine hydroxymethyltransferase n=9 Tax=Poaceae RepID=Q7Y1F0_ORYSJ 0.0
• FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine hydroxymethyltransferase 0.0
C-terminus
sp_v3.0_unigene71190 SustainPine v3.0 271
• AutoFact: Acetyl-CoA carboxylase, putative n=1 Tax=Ricinus communis RepID=B9SFG9_RICCO 3.0e-14
• FL-Next: sp=Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 7.328e-13
C-terminus
sp_v3.0_unigene71504 SustainPine v3.0 311
• AutoFact: Chloroplast envelope membrane 70 kDa heat shock-related protein n=1 Tax=Spinacia oleracea RepID=HSP7E_SPIOL 8.00001e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 2.99598e-42
Internal
sp_v3.0_unigene72279 SustainPine v3.0 221
• AutoFact: Acetyl-CoA carboxylase, putative n=1 Tax=Ricinus communis RepID=B9SFG9_RICCO 4.0e-15
• FL-Next: sp=Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 7.328e-13
C-terminus
sp_v3.0_unigene72372 SustainPine v3.0 390
• AutoFact: Calcineurin B-like protein 03 n=12 Tax=Magnoliophyta RepID=A5AHA7_VITVI 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Calcineurin B-like protein 3 9.336e-20
N-terminus
sp_v3.0_unigene72674 SustainPine v3.0 300
• AutoFact: Putative plastid ribosomal protein L11 [Oryza sativa Japonica Group] 3.00004e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 50S ribosomal protein L11, chloroplastic 5.47207e-42
Internal
sp_v3.0_unigene72791 SustainPine v3.0 156
• AutoFact: pfam03214, RGP, Reversibly glycosylated polypeptide 3.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-1,4-glucan-protein synthase [UDP-forming], putative 2.83e-15
Internal
sp_v3.0_unigene72954 SustainPine v3.0 302
• AutoFact: heat shock protein 70 [Coffea arabica] 5.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 1.602e-32
Internal
sp_v3.0_unigene73470 SustainPine v3.0 222
• AutoFact: Proteasome subunit alpha type n=1 Tax=Picea sitchensis RepID=A9NK23_PICSI 1.0e-10
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 1.189e-10
Misassembled
sp_v3.0_unigene73549 SustainPine v3.0 406
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 1.4013e-45
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
N-terminus
sp_v3.0_unigene73550 SustainPine v3.0 403
• AutoFact: Glutamine synthetase nodule isozyme n=2 Tax=Pisum sativum RepID=GLNA1_PEA 1.0e-24
• FL-Next: sp=Glutamine synthetase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene73593 SustainPine v3.0 418
• AutoFact: Fructose-bisphosphate aldolase n=2 Tax=Picea sitchensis RepID=A9NUC9_PICSI 7.0e-39
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
C-terminus
sp_v3.0_unigene73740 SustainPine v3.0 347
• AutoFact: Glutamine synthetase n=2 Tax=Tuber RepID=GLNA_TUBBO 5.00264e-43
• FL-Next: sp=Glutamine synthetase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene73759 SustainPine v3.0 397
• AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=B8LMQ9_PICSI 1.0e-35
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
Misassembled
sp_v3.0_unigene74014 SustainPine v3.0 457
• AutoFact: chaperonin-60kD, ch60 [Aedes aegypti] gb|EAT36327.1| chaperonin-60kD, ch60 [Aedes aegypti] 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chaperonin-60kD, ch60, putative 1.127e-11
Putative C-terminus
sp_v3.0_unigene74280 SustainPine v3.0 403
• AutoFact: Calcineurin B-like protein 01 n=1 Tax=Selaginella moellendorffii RepID=C4P7X6_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Calcineurin B, putative 1.275e-26
C-terminus
sp_v3.0_unigene74368 SustainPine v3.0 446
• AutoFact: Biotin/lipoyl attachment:Carbamoyl-phosphate synthase subunit L n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=D6RJR4_COPC7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acetyl-CoA carboxylase 2.793e-11
Internal
sp_v3.0_unigene74412 SustainPine v3.0 435
• AutoFact: Putative reversibly glycosylated polypeptide , 3'-partial (Fragment) n=1 Tax=Oryza sativa Japonica Group RepID=Q84MY1_ORYSJ 9.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reversibly glycosylated polypeptide 2.135e-14
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain