Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nuclease activity

Term: GO:0004518  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene103936 SustainPine v3.0 390
• AutoFact: PREDICTED: similar to Tetratricopeptide-like helical n=1 Tax=Vitis vinifera RepID=UPI0001984A05 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.084e-20
Internal
sp_v3.0_unigene104547 SustainPine v3.0 198
• AutoFact: Exonuclease, putative n=1 Tax=Ricinus communis RepID=B9SU84_RICCO 2.0e-10
• FL-Next: tr=Exonuclease, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene104852 SustainPine v3.0 491
• AutoFact: DNA repair protein RAD50 [Arabidopsis thaliana] sp|Q9SL02.2|RAD50_ARATH RecName: Full=DNA repair protein RAD50; Short=AtRAD50 gb|AAF36810.1|AF168748_1 DNA repair-recombination protein [Arabidopsis thaliana] gb|AAD15407.2| putative RAD50 DNA repair protein 7.0e-30
• FL-Next: sp=DNA repair protein RAD50; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene105224 SustainPine v3.0 144
• AutoFact: 5' repair endonuclease [Arabidopsis thaliana] 1.0e-08
• FL-Next: Isoform 3 of DNA repair endonuclease UVH1 OS=Arabidopsis thaliana GN=UVH1 0.0
Internal
sp_v3.0_unigene106536 SustainPine v3.0 228
• AutoFact: exonuclease 1 [Arabidopsis thaliana] gb|AEE31111.1| exonuclease 1 [Arabidopsis thaliana] 3.0e-26
• FL-Next: Isoform 2 of Exonuclease 1 OS=Arabidopsis thaliana GN=EXO1 0.0
• Sma3: Exonuclease 1 1.27e-08
Internal
sp_v3.0_unigene107010 SustainPine v3.0 266
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene108941 SustainPine v3.0 247
• AutoFact: essential meiotic endonuclease 1A [Arabidopsis thaliana] gb|AAP21264.1| At2g21800 [Arabidopsis thaliana] dbj|BAE99972.1| hypothetical protein [Arabidopsis thaliana] gb|AEC07223.1| essential meiotic endonuclease 1A [Arabidopsis thaliana] 7.0e-15
• FL-Next: sp=Crossover junction endonuclease EME1B; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative uncharacterized protein At2g21800 4.916e-10
Internal
sp_v3.0_unigene109551 SustainPine v3.0 401
• AutoFact: pfam01535, PPR, PPR repeat 3.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 5.226e-21
Internal
sp_v3.0_unigene110224 SustainPine v3.0 440
• AutoFact: Unassigned protein
• FL-Next: sp=DNA mismatch repair protein MSH1, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene110998 SustainPine v3.0 466
• AutoFact: mitochondrial editing factor 22 [Arabidopsis thaliana] sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770 dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana] gb|AEE75244.1| mitochondrial editing fa 9.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.015e-30
Putative Complete
sp_v3.0_unigene112336 SustainPine v3.0 273
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600 gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06244.1| pentatricopeptide repe 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 6.664e-16
Internal
sp_v3.0_unigene112870 SustainPine v3.0 595
• AutoFact: essential meiotic endonuclease 1A [Arabidopsis thaliana] gb|AAP21264.1| At2g21800 [Arabidopsis thaliana] dbj|BAE99972.1| hypothetical protein [Arabidopsis thaliana] gb|AEC07223.1| essential meiotic endonuclease 1A [Arabidopsis thaliana] 0.0
• FL-Next: sp=Crossover junction endonuclease EME1; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Putative uncharacterized protein At2g21800 5.358e-10
Internal
sp_v3.0_unigene113276 SustainPine v3.0 416
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T4R0_RICCO 4.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 2.11596e-43
Putative Complete
sp_v3.0_unigene113427 SustainPine v3.0 439
• AutoFact: Unassigned protein
• FL-Next: sp=Flap endonuclease GEN-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene115143 SustainPine v3.0 337
• AutoFact: endonuclease [Arabidopsis thaliana] 6.0e-23
• FL-Next: sp=Crossover junction endonuclease MUS81; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene116527 SustainPine v3.0 758
• AutoFact: DNA mismatch repair protein n=3 Tax=Arabidopsis RepID=Q84LK0_ARATH 0.0
• FL-Next: sp=DNA mismatch repair protein MSH1, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA mismatch repair protein 4.076e-22
Internal
sp_v3.0_unigene123041 SustainPine v3.0 518
• AutoFact: endonuclease [Arabidopsis thaliana] 1.0e-15
• FL-Next: sp=Crossover junction endonuclease MUS81; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene124440 SustainPine v3.0 377
• AutoFact: Putative pentatricopeptide repeat protein n=5 Tax=Malvoideae RepID=B2ZAT1_9ROSI 7.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.052e-09
N-terminus
sp_v3.0_unigene124460 SustainPine v3.0 265
• AutoFact: 5' repair endonuclease [Arabidopsis thaliana] 9.0e-27
• FL-Next: sp=DNA repair endonuclease UVH1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Ultraviolet hypersensitive 1 3.343e-09
Internal
sp_v3.0_unigene124752 SustainPine v3.0 291
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600 gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06244.1| pentatricopeptide repe 4.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 3.58732e-43
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain